Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0405 ATGTTGCATAGGGCAGCAAGCAATGCATATTCATGGTGGTGGGCCAGCCACATAAGAACAAAGCAGTCAAAATGGCTGGATCAAAGCCTCCAAGATATGGAGGAGAAGGCGGCTAATACCCTCAAAATCCTGGATGATGATGGAGACTCATTTGCAAAGAGAGCAGAAATGTATTACAAGAAGAGGCCAGAACTTGTAGGTTATGTGGAAGAATCTTTTCGAGCATATAAAGCCTTAGCAGATAGATATGATCATTTATCAAAGGAGCTCCAAAGTGCTAACCGTACTATTGCTAGTGTCTTCCCGGAACAAGTTCAATATCGGACCGATGATGATTCTGAAGAAGAGAGTGAGACAGGAACAAATGCATCATCTCCAGACCTCAACAATAATAAAAGAGTCATTCCTAAAGTCCCAAAGAATGAGTTTAGAAGCCCATCCATGTTACTCTCTAGGAAGGGGCCACCTAGGGGAAATGCTACTACCCCTTCAAAGTTTGCTCCAAGTCCACCTTCAGGTCTATCAAAGCATGCAGCAATAGGAGAAATTGATAAGCTTCAGAAGGACATTTTGGCACTACAGACTGAGAAAGAGTTTGTGAGGAGTTTGTATGAGCGTGCCTACGAAAAGTATTGGGAAATTGAAGATCAGATCACAGAAATGCAGAAAAGAGTTTGCAGCTTGCAAGATGAGTTTGGTGTTGGCACAGTCATAGAAGATAATGATGCTCGGACTTTGATGGCAGCCACAGCTCTAAAATCATGCAAAGAGACCTTGAATAAGTTGCAAGAGATACAAGAACGATCATCTAAAGAATCTAAAGTGGAGTACCAAAGGGTTAAGGAAGCTCATGAGATGTTTGAAGCTCTTAGAGATGAATTCATTTCTAAATATATGGTAGGACAAGACCTATGCAATAGGGAGAAAACCGAGAGCGTGAGAGCAGAACAAGAAAGCATGGATGATGAGATAGCTGGATTGGAACACGAGGTGCATGATGTAGGGCAGTTGCGAGAGAAGATTAGGGAAAAGTTGGAGAAAGACTCAAGTAAGTCCTTCACTGTGACTGAAATGGCTGAGAAAATTGATGAGCTTGTGGATAAGGTTGTTTCCTTGGAAACTGCGGTGACATCTCAGACTGGCTTGGTAAAGAGACTGAGATCAGAAACAGATGAACTTCAGACAAATATAAAGAATTTGGAACAAGACAAGGAAATGCTCATAGAAGGTTCAGAAGTTACTAAGAAGAGGTTGGATGAATTGGAGAATGAGATGAGGAGAGTTCAACTTCTCAACCGAAGTGTCCGAAGCCAAGACAACAACCTTCAAACACACTTTACTGAAGCTAGCTGCAATATTGAGCACCTTTCTGAAAAGTTGAATGATATGAAACCAGATGTGGAGGAAGAGAACATGGTGCTTTACAAGAAGAAGAGAAGTGCTTCAGTTAGTGAACCAAGAAAGGAGTCTAAAAAGCATGGTAATACACTGTCTCTTGGTAGCTTAGCAGACATGAAGGATGTCAAAACAATAAGGGATCTTGCTAATGAAAATGTCGACAATAACAGGCTGAATTTGAGTGAAAGTAGTTTTATGCTTGAAAGGAATCCGAAACTTCTCCAACAAGATAAGGATTATGTGTATGACACAATGAGTAATGGTGACAATGAATCACAGGATTTGGACATTGTAGAGGAAGATCAACCTAATTGGAGGCAAATGTTTATAAGTGGATTAGATGACCGAGAAAAGATTCTGTTGGAGGAGTACACATCAGTTTTAAGGAACTATAAGGATGTAAGGACTAAGATCGATGATGTTGAGAAGAAAAATCGGGACAGCATTTTTGAGTTGGCACTTCAGCTAAGGGAATTGAAGAATACTGTTGTGAGCAAGGATAAAGAGATAAACTATTTACAACAGAAGCTGAACTTTCCTGAGGCAACTCCTGGTGAAAGTCCATACACTCTTACCACAGAATACAAATATACACCAAATGAAGCTGCTCTTCAAAAAGCAGCTGAAGGAGGAGCAGACATGCATGACTCGGAAATCTCACCTTTAAATTTAGATGCAAATTCTGTGAGAACTCCTTTTTCAGAACAAAATAATGTTGGAAGCACAACAAATAGTAGCAGCTATGCAACTATAAAAATGACGCTAGAGAAGCTTATGACAAGCCAGGATAAGCACCGTAACCTTTCAACCTTGGAACTGAAATTCCGGTCAGAACTTGATAGTCTTCTAGAGGAGAACCTAGAGTTTTGGTTGAGGTTTAGCACCTCAGTTCACCAGATTCGAAAGTTCCAAAACTCCATCCAGGACTTAAAAGCAGAACTGAGGACAATAAAAGAAAACAATAATTCTGAAGGGCATTCACATTCTAAACATCATCAGCCTATTCAATCTCAGCTGAGACCGATATTCAGACACTTGAGAGAGATACGAACCGAGTTATCGCTATGGCTGGAACATAATTCAGTGTTGCAGGATGAACTGCAAGGTCGATATTCATCCTTGTGCGACATCCAAGATAAAATAGCAAGAGCAGGGAGCACTGCAGCACCTGAAGGGGAGAAGGCAGAAGAAGAGCTAAGTGGATATCAGGCTGCAAAGTTTCAAGGTGAAGTCCTTAACATGAAACAAGAGAACAGTAAAGTTGCAAGTGAATTGCAAGCAGGTCTAAGCCTTGTGAAGGGAATGAAAGTTGATGTTGAGAAGACATTGGATGAGCTAGATCAAGATATAGGAATTAATAGTAATAATCAAGGCCAAACCAAACCCTCCTCAAGTCGTGCTCGAATACCCTTGAGGTCTTTCTTGTTTGGAGCCAAGTTAAAGAGGCAAAGGCAATCTCTATTTGCTTGTGTCAATCCATCAATGCATAAATATGATGATATGCCATCGCCTGATGATGCTCCTATATAG 2928 0.4071 MLHRAASNAYSWWWASHIRTKQSKWLDQSLQDMEEKAANTLKILDDDGDSFAKRAEMYYKKRPELVGYVEESFRAYKALADRYDHLSKELQSANRTIASVFPEQVQYRTDDDSEEESETGTNASSPDLNNNKRVIPKVPKNEFRSPSMLLSRKGPPRGNATTPSKFAPSPPSGLSKHAAIGEIDKLQKDILALQTEKEFVRSLYERAYEKYWEIEDQITEMQKRVCSLQDEFGVGTVIEDNDARTLMAATALKSCKETLNKLQEIQERSSKESKVEYQRVKEAHEMFEALRDEFISKYMVGQDLCNREKTESVRAEQESMDDEIAGLEHEVHDVGQLREKIREKLEKDSSKSFTVTEMAEKIDELVDKVVSLETAVTSQTGLVKRLRSETDELQTNIKNLEQDKEMLIEGSEVTKKRLDELENEMRRVQLLNRSVRSQDNNLQTHFTEASCNIEHLSEKLNDMKPDVEEENMVLYKKKRSASVSEPRKESKKHGNTLSLGSLADMKDVKTIRDLANENVDNNRLNLSESSFMLERNPKLLQQDKDYVYDTMSNGDNESQDLDIVEEDQPNWRQMFISGLDDREKILLEEYTSVLRNYKDVRTKIDDVEKKNRDSIFELALQLRELKNTVVSKDKEINYLQQKLNFPEATPGESPYTLTTEYKYTPNEAALQKAAEGGADMHDSEISPLNLDANSVRTPFSEQNNVGSTTNSSSYATIKMTLEKLMTSQDKHRNLSTLELKFRSELDSLLEENLEFWLRFSTSVHQIRKFQNSIQDLKAELRTIKENNNSEGHSHSKHHQPIQSQLRPIFRHLREIRTELSLWLEHNSVLQDELQGRYSSLCDIQDKIARAGSTAAPEGEKAEEELSGYQAAKFQGEVLNMKQENSKVASELQAGLSLVKGMKVDVEKTLDELDQDIGINSNNQGQTKPSSSRARIPLRSFLFGAKLKRQRQSLFACVNPSMHKYDDMPSPDDAPI 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0405 975 Coils Coil 248 272 - -
Lal22g0405 975 Coils Coil 355 375 - -
Lal22g0405 975 MobiDBLite consensus disorder prediction 102 176 - -
Lal22g0405 975 PANTHER PROTEIN NETWORKED 2D 1 963 - -
Lal22g0405 975 MobiDBLite consensus disorder prediction 478 494 - -
Lal22g0405 975 Coils Coil 76 96 - -
Lal22g0405 975 Coils Coil 176 224 - -
Lal22g0405 975 Coils Coil 383 438 - -
Lal22g0405 975 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Lal22g0405 975 Coils Coil 622 642 - -
Lal22g0405 975 PANTHER PROTEIN NETWORKED 2A 1 963 - -
Lal22g0405 975 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
Lal22g0405 975 Coils Coil 766 786 - -
Lal22g0405 975 MobiDBLite consensus disorder prediction 478 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0405 Lal-Chr22 2643915 2648561 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0405 - - gmx:100784970 1288.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0405 22 2643915 2648561 Lal22g0405 22 2643915 2648561 ECH
Lal18g1186 18 14738799 14742661 Lal22g0405 22 2643915 2648561 LSH