Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0402 ATGCACGGTCGTCCTCGTAAACCGTTGAAGCAAGAAGACACGTCAGCTTTATCAGCCAAAACTCAAAACCTTCGATCACTTCAATCTCACTTCCTCACCAATCATCATAATCGCGTATACACAAAGGAAGCATTAGATGTGAACGCCAAGTTAGTTGAGAACAATCCAGAATGGCACACTGCTTGGAATTACAGAAAGCTTGCAGTTCAACATTTCCTCTCTGGTCCCGATTCTAATCCTGATTACGTTAAATCTATTCTCGATGAAGAACTCAGAGTGGTGGAGAGTGCATTGAGGAAGAATTTTAAGTCATATGGTGCGTGGCATCATCGGAAATGGGTACTAAGCAAGGGGCCCTCGTCCATAGACAACGAGTTACGCCTTCTCGATGCTTTTCAGAAGGCCGATCCTCGAAATTTCCATGCTTGGAATTACCGAAGGTTTGTTACTGAACTGATGAAAAGATCCGATGAGGATGAGTTGAAATACACAGAGGATGTGATAGGGGCTAACTTTAGCAATTACTCTGCGTGGCACAATCGTAGTATCCTGTTGTCTAATTTGCTGAAAAGAAAGGCTGAAGGATATTTCCCTGAAGAGAATGTTTTGAAAGAGGAGTATGAGCTTGTCCACAATGCTATTTTTACTGATCCAGATGATCAGAGTGGCTGGTTTTATCATCTTTGGCTTATTGATCAAACAGTGAAAATTGATGCTCCTCTACTTGTTTCATCTTGGCCTTCCCATGGATCTTCTCTAACTCTACAGGGAAACAAGTGCCTTCATGGTTCTGGTTTATCTGTGCTAAATTGTACACTTTCAGACGTAGGAAAGTTTCCGGTCATTCTTTATTTTAGTCAAGCTGTTGAAGGCATCAACTCATCCACAGTAACTGTTAAGTCTGAAGTTTTAACTGGCGATCTGGTTTGGAAACCAATTTCAACAAATAACTCAAATACTGCTCAAGTTTGGGTCACATATCTAAATATTGGAGATATAGAGCCCCAATTGTCCGAAACTTATTCACTAGAGGTCAGCCTTGGTCATTCTAAGGGTATTGTATCTTCAAGTGGATACCATTATGGCCATCCTACCCAAATTTCCTTTAAACTGGGAATACAGGCTGCCTATGAAGAACCTGCTAAAGGGCAGGGTGAAAAAATGGCTTCATGGAATGATAATGATTTCCAAAGTATTGAGCATTATCAGGAATCAGAGGCCATTTTTTCTACTGATCAACTAACTAGTGAGAACGATCATAATCAAACAACTTCCATTTGGTGTGCAGAGGCCATTGTTAAAGAAATAACCGAATTTCGAGAACTATTGTCTGAGTCTGACTGTAAACTTGGAAAGCTTACACTTGCTAGACTGCTGACTGCTCTTGATTCATTGCCATCTACATATGCCAAAAAAATGGCCCATGCCGGTGAAGTTATTGAACTTTATGATGATCTGATGAAGTTGGATCCAACACATTCTCTATACTACAAGGACAAGCGTAGTCTGACATTACTTCATAAGATAACTTCAACTAGGGAAACTTTACTACCATACTGCCACTACTATAAAGATGCAACAGAGTCAATTGCTGGTCATGTTTGTCTACGATTACAAAATCTATCGTTATCACGGATTGGATGCATTGAGAATTTGTTGTGGGTGCAAACGCTAGATCTTAGCCACAACGAACTTCAATCAATTGAAGGATTGGAGGCCATGCAACTACTATCTTGTTTGAATTTGAGTCACAATAATTTTGGTAGCTTTACTGCTCTAGCACCTCTTAGACTGCTTACATCACTGAAAGTGTTGAATATCTCATACAACAAGATAGGCTCGCACTCTATTGACACAAGAAGATACCTATGCTCTTCTCCTTTGTCTCATACTGAAAATTTTGCATGGGACCGTTTTGAAATCCTTGCGGGCAGCTTCAGTGCCACAAAATTTTGGGAAGCCTTCTTGATATTTGATAGTTTGAATCTGACAGAGTTAGACATAAAAGGAAATGAAGTTGCCGATGAGAACTTCAGATTATTTCTTGTCAAAGTTTTGCCTTCACTGAAGTGGCTGGATGGTGAAAAATTATGTTGA 2097 0.4001 MHGRPRKPLKQEDTSALSAKTQNLRSLQSHFLTNHHNRVYTKEALDVNAKLVENNPEWHTAWNYRKLAVQHFLSGPDSNPDYVKSILDEELRVVESALRKNFKSYGAWHHRKWVLSKGPSSIDNELRLLDAFQKADPRNFHAWNYRRFVTELMKRSDEDELKYTEDVIGANFSNYSAWHNRSILLSNLLKRKAEGYFPEENVLKEEYELVHNAIFTDPDDQSGWFYHLWLIDQTVKIDAPLLVSSWPSHGSSLTLQGNKCLHGSGLSVLNCTLSDVGKFPVILYFSQAVEGINSSTVTVKSEVLTGDLVWKPISTNNSNTAQVWVTYLNIGDIEPQLSETYSLEVSLGHSKGIVSSSGYHYGHPTQISFKLGIQAAYEEPAKGQGEKMASWNDNDFQSIEHYQESEAIFSTDQLTSENDHNQTTSIWCAEAIVKEITEFRELLSESDCKLGKLTLARLLTALDSLPSTYAKKMAHAGEVIELYDDLMKLDPTHSLYYKDKRSLTLLHKITSTRETLLPYCHYYKDATESIAGHVCLRLQNLSLSRIGCIENLLWVQTLDLSHNELQSIEGLEAMQLLSCLNLSHNNFGSFTALAPLRLLTSLKVLNISYNKIGSHSIDTRRYLCSSPLSHTENFAWDRFEILAGSFSATKFWEAFLIFDSLNLTELDIKGNEVADENFRLFLVKVLPSLKWLDGEKLC 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0402 698 Gene3D Protein prenylyltransferase 1 245 - -
Lal22g0402 698 ProSiteProfiles Leucine-rich repeat profile. 576 597 IPR001611 GO:0005515
Lal22g0402 698 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 202 236 IPR002088 GO:0008318|GO:0018342
Lal22g0402 698 Pfam Protein prenyltransferase alpha subunit repeat 87 116 IPR002088 GO:0008318|GO:0018342
Lal22g0402 698 Pfam Protein prenyltransferase alpha subunit repeat 203 233 IPR002088 GO:0008318|GO:0018342
Lal22g0402 698 Pfam Protein prenyltransferase alpha subunit repeat 158 187 IPR002088 GO:0008318|GO:0018342
Lal22g0402 698 Pfam Protein prenyltransferase alpha subunit repeat 123 151 IPR002088 GO:0008318|GO:0018342
Lal22g0402 698 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 40 74 IPR002088 GO:0008318|GO:0018342
Lal22g0402 698 SUPERFAMILY Protein prenylyltransferase 19 502 - -
Lal22g0402 698 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 86 120 IPR002088 GO:0008318|GO:0018342
Lal22g0402 698 SUPERFAMILY L domain-like 533 613 - -
Lal22g0402 698 Gene3D Ribonuclease Inhibitor 524 698 IPR032675 -
Lal22g0402 698 PANTHER - 1 608 - -
Lal22g0402 698 Pfam Leucine Rich repeat 661 676 IPR001611 GO:0005515
Lal22g0402 698 Pfam Leucine Rich repeat 600 613 IPR001611 GO:0005515
Lal22g0402 698 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 121 155 IPR002088 GO:0008318|GO:0018342
Lal22g0402 698 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 1 608 - -
Lal22g0402 698 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 156 190 IPR002088 GO:0008318|GO:0018342
Lal22g0402 698 PRINTS Leucine-rich repeat signature 555 568 - -
Lal22g0402 698 PRINTS Leucine-rich repeat signature 599 612 - -
Lal22g0402 698 ProSiteProfiles Leucine-rich repeat profile. 554 575 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0402 Lal-Chr22 2625968 2631765 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0402 K14050 - gmx:100807900 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0402 22 2625968 2631765 Lal22g0402 22 2625968 2631765 ECH