Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0396 AAATATAAAGTCTTCCCAAACAAATTTCATTTTTCAACCAACACAACTAAATACCTTGTTTCTAATTTCGCACCATTATTCCTAATTTCCTTTTCTCCCATTTTGAAGATTCACTTTTCTATTGTATCATTTGTAATGGAAGATGTATCAGATCAATCCACTAGCCTATGTACTCACTGTGATCGGGTTATCCCTGCTGCGAATATTAATTTGCATTATGCTCATTGCTCCCGGAACCTTGAAAAATGCAAAGTTTGTGGTGATATGGTTCCCAAAAAACATGCTGATGATCACTATTTAAGCACTCATGCACCGGTTTCCTGTTCATTGTGCAGTGAGACGATGGAGCGTGATATTTTGGATATCCATAGAGGTGAAAATTGCCCTCGAAGGATTATCACTTGCGAGTTCTGTGAGTTCCCATTGCCAGCAATTGATCTAGCTGAGCATCAGGAAGTATGTGGGAACCGGACAGAACTTTGTCACCTTTGTAACAAATATGTTAGACTCCGTGAAAGATACACCCATGAAGTTGGGTGCAGCGGTAACCAAGATCATACTGTGGAGCCTTCAAGGAATGTGAGGGAAGCTGAAAGAGAGGAAGGTGCTAGAAGAAGGCGTCCCAATGACATCTCAACAAGACGTCTTCTTTTCACAATAGCAATCACTGGTGTTGCTGTTATACTGGGGTCTTTCTTTTTTACAAAGGAAAGTAGAGCCCAGTGA 726 0.4063 KYKVFPNKFHFSTNTTKYLVSNFAPLFLISFSPILKIHFSIVSFVMEDVSDQSTSLCTHCDRVIPAANINLHYAHCSRNLEKCKVCGDMVPKKHADDHYLSTHAPVSCSLCSETMERDILDIHRGENCPRRIITCEFCEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRERYTHEVGCSGNQDHTVEPSRNVREAEREEGARRRRPNDISTRRLLFTIAITGVAVILGSFFFTKESRAQ 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0396 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 49 102 IPR013083 -
Lal22g0396 241 MobiDBLite consensus disorder prediction 182 206 - -
Lal22g0396 241 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 49 238 - -
Lal22g0396 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 157 IPR013083 -
Lal22g0396 241 MobiDBLite consensus disorder prediction 189 206 - -
Lal22g0396 241 PANTHER XIAP-ASSOCIATED FACTOR 1-LIKE 49 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0396 Lal-Chr22 2580743 2583738 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0396 - - gmx:100527695 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0396 22 2580743 2583738 Lal22g0396 22 2580743 2583738 ECH