Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0230 ATGAATCGTAGTTTTAGGGCTCAGGAATCTCAAATGCAAGCTGTAGTGAAGCAACAATTTGGTGTTCTGAGGTCTTCTCTCATGAAGGATAAAGACGATGAGCTCACTTTGTTCCTCGAAATGAGGAACCGCGACAAGGACCACGGGAACGATCTCCTGCTTCGCGCCTCACAGGATTTCGATGCTCCATTAGGTCCTTCGCGTAAGACCGGTGTTGATGATTTTCTAAATTCCGAAAATGATAAGAATGACTATGATTGGCTTCTTACTCCTCCTAGGACTCCTCTATTTCCTTCATTGGAGATGGAAACTCAAAAAACTTTTATGAGTCAGCTTGGTGCTCCAACTGCACGACCCACGACATTAAAATCTAGATTGGCAAATCCTCAGTTAGAGCCCACTGGAAGGAACAACTTAGTATCTAAACAACCAGCTTCCTCCCCTGGGTTGAGCTCTTCAAGTAGTGGAAATAGGAGGCCCCCATCTTCAGCGAATCCAGGATTAAGACCTGCAATTCCTACTGGACGCTCTACTTTGAGCACAGCTTCAAAATCAGTGAGACCTTCAACACCTACTTCTCGGGCAACTTTACCTTCAACTAGGACTATTGTACCTATGACCACAGTTTCCACGACTAAGCCCATAGTTTCTGCTACTAAAACTACAGTCTCTGCTGCTAAACCCACAATTCCATCTCGATCCTCTACACCTTTGTCAAGATCTATTGCAAGATCTTCAATGCCAACTAGCAGGCCTACCTTACCTCAATCCAGACCCACATCAAGGGCATCTACCCCAACTCGACGACCATCTACACCATTAAGTGCACCCAATATATCTTCTCCTTCAGTTAAGACTTCTTCAATCTCTAAGCCAGCTCCCATTACATCAAGGCAGCCGGTACCATCACATGGCACATCACCTACAGTGAGATCAAGACCATGGAAGCCATCAGAGATGCCTGGCTTTTCACTTGATGCTCCACCCGATTTGAGGATAACACTACCAGATAGGCCACTCTCAGCAACTAGGGGAAGGCCAGGAGTACCCAATTCTAGGTCTTCATCTGTTGAGCCTGCTTCTACTGGCAGACCAAAGCGGCAATCATGCTCTCCTTCTAGAGGGCGGTCCTCCAATGGCATTTCTCATACAACCGGAAGCTCCATGCCAGCGGTTAGTCGTGGGTACTCCAAAGTAAATGACAATGTCAGTCCTGTTGTGATTGGCACCAAAATGGTTGAGAGGATAATAAATATGCGGAAACTAGCACCACCCAGGCTAGATGACAAAAAATTTCCCCACAGTAATCTGTCTGGCAAATCAGCATCTCCAGAAAACTCTGGTTTTGGAAGAACACTCTCGAAGAAATCCTTGGATATGGCTATTAGGCATATGGATATAAGGCGAAGGGTTCCAGGCAATTTACGGCCATTAATGACAAATATTCCTGCATCTTCTATGTATAGTGTGCGATCAGGGTCTCAGCATAGCCGAACTGTTAGTGTCTCAGACTCTCCTCATGCCACAAGCAGTAATGCTAGTTCTGAAGTGAGTGTAAACCAAAAGGGTATTTGTCTGCATAGCAGTGAAATAGATGATGATAATGTGAGTGAGATAGGTGGTCAATCTCCTGCCAGTATAGGGTGCAAGTAA 1653 0.4549 MNRSFRAQESQMQAVVKQQFGVLRSSLMKDKDDELTLFLEMRNRDKDHGNDLLLRASQDFDAPLGPSRKTGVDDFLNSENDKNDYDWLLTPPRTPLFPSLEMETQKTFMSQLGAPTARPTTLKSRLANPQLEPTGRNNLVSKQPASSPGLSSSSSGNRRPPSSANPGLRPAIPTGRSTLSTASKSVRPSTPTSRATLPSTRTIVPMTTVSTTKPIVSATKTTVSAAKPTIPSRSSTPLSRSIARSSMPTSRPTLPQSRPTSRASTPTRRPSTPLSAPNISSPSVKTSSISKPAPITSRQPVPSHGTSPTVRSRPWKPSEMPGFSLDAPPDLRITLPDRPLSATRGRPGVPNSRSSSVEPASTGRPKRQSCSPSRGRSSNGISHTTGSSMPAVSRGYSKVNDNVSPVVIGTKMVERIINMRKLAPPRLDDKKFPHSNLSGKSASPENSGFGRTLSKKSLDMAIRHMDIRRRVPGNLRPLMTNIPASSMYSVRSGSQHSRTVSVSDSPHATSSNASSEVSVNQKGICLHSSEIDDDNVSEIGGQSPASIGCK 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0230 550 MobiDBLite consensus disorder prediction 127 162 - -
Lal22g0230 550 MobiDBLite consensus disorder prediction 426 452 - -
Lal22g0230 550 MobiDBLite consensus disorder prediction 488 525 - -
Lal22g0230 550 MobiDBLite consensus disorder prediction 488 550 - -
Lal22g0230 550 PANTHER PROTEIN, PUTATIVE-RELATED 1 165 - -
Lal22g0230 550 PANTHER PROTEIN, PUTATIVE-RELATED 165 547 - -
Lal22g0230 550 MobiDBLite consensus disorder prediction 220 397 - -
Lal22g0230 550 PANTHER GASTRIC MUCIN-LIKE PROTEIN 1 165 - -
Lal22g0230 550 PANTHER GASTRIC MUCIN-LIKE PROTEIN 165 547 - -
Lal22g0230 550 MobiDBLite consensus disorder prediction 436 452 - -
Lal22g0230 550 MobiDBLite consensus disorder prediction 220 313 - -
Lal22g0230 550 MobiDBLite consensus disorder prediction 127 208 - -
Lal22g0230 550 MobiDBLite consensus disorder prediction 64 89 - -
Lal22g0230 550 MobiDBLite consensus disorder prediction 174 208 - -
Lal22g0230 550 MobiDBLite consensus disorder prediction 347 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0230 Lal-Chr22 1431739 1436991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0230 - - gmx:100783818 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0230 22 1431739 1436991 Lal22g0230 22 1431739 1436991 ECH
Lal22g0230 22 1431739 1436991 Lal6g0241 6 1579819 1583383 LSH
Lal3g0586 3 4438572 4443361 Lal22g0230 22 1431739 1436991 PCT
Lal5g1128 5 14026599 14031901 Lal22g0230 22 1431739 1436991 PCT
Lal22g0230 22 1431739 1436991 Lal3g0586 3 4438572 4443361 PCT
Lal22g0230 22 1431739 1436991 Lal5g1128 5 14026599 14031901 PCT