Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0181 ATGGAGTTCCCATTGATCAACTTGGTGAAGCTGAATGGTGAGGAGAGAAAAGATACCATGGAGCAAATCAAAGATGCTTGTGAGAACTGGGGATTCTTTGAGGTCATCAATCATGGCATACCCTACGAGCTTATGGACACTTTGGAAAGGTTGACCAAAGAACACTACGGGAAATGCATGGAACATAGGTTCAAGGAGTTAGTTGCAACCAAAGGGTTAGATGCTGTTGAAACTGAGGTTAAGGATATGGATTGGGAGAGTACCTACCATGTCCGTCATCTCCCTCAATCAAACATTTCAGACCTCCTTGATCTCACTCATCAACACAGGGAAGTGATGAAGGAGTTTGCTTTAAGGTTAGAGAAACTAGCAGAGGATCTGTTAGACTTGTTATGTGAGAATCTGGGACTAGAGAAGGGATACCTGAAGAAGGCCTTCTATGGATCAAGGGGGCCAACTTTTGGCACAAAGGTTGCTAACTACCCTCCATGTCCTAATCCAGAGCTGGTAAAGGGTCTTCGTGCCCATACTGATGCTGGTGGTATTATCCTTCTCTTCCAAGATGATAAGGTTAGTGGCCTACAACTTCTCAAAGATGGTCAATGGATTGATGTGCCCCCAATGCGCCATTCCATTGTGGTTAACCTTGGTGACCAGCTTGAGGTAATCACCAATGGTAAGTACAAAAGTGTGGAGCACCGTGTGATTGCTCAGACTGATAGCACAAGAATGTCAATAGCCTCATTCTACAACCCTGGCAGTGATGCTGTTATCTATCCTGCACCAGCATTGTTGGAGAAAGGGACAGAGGACAAAAGTAAGGTGTACCCAAAATTTGTGTTTGAAGACTACATGAAGATCTATGCTGGGTTGAAGTTCCATGCCAAGGAGCCAAGATTTGAAGCCTTCAAAGCACCAGATGTCAATCTGGGTCCAATTGCAACTGTCTAA 951 0.4458 MEFPLINLVKLNGEERKDTMEQIKDACENWGFFEVINHGIPYELMDTLERLTKEHYGKCMEHRFKELVATKGLDAVETEVKDMDWESTYHVRHLPQSNISDLLDLTHQHREVMKEFALRLEKLAEDLLDLLCENLGLEKGYLKKAFYGSRGPTFGTKVANYPPCPNPELVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVEHRVIAQTDSTRMSIASFYNPGSDAVIYPAPALLEKGTEDKSKVYPKFVFEDYMKIYAGLKFHAKEPRFEAFKAPDVNLGPIATV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0181 316 Pfam 2OG-Fe(II) oxygenase superfamily 158 252 IPR044861 -
Lal22g0181 316 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE-LIKE 2 308 - -
Lal22g0181 316 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 308 - -
Lal22g0181 316 SUPERFAMILY Clavaminate synthase-like 1 301 - -
Lal22g0181 316 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 152 252 IPR005123 -
Lal22g0181 316 Pfam non-haem dioxygenase in morphine synthesis N-terminal 4 63 IPR026992 -
Lal22g0181 316 Gene3D - 1 315 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0181 Lal-Chr22 1132648 1134436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0181 1 251 Glycosyltransferase AT5G59530 32.824 7.49e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0181 K05933 - gmx:100814810 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0181 22 1132648 1134436 Lal17g1606 17 17430492 17431106 PCT