Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0088 ATGGAGAATAGTGGAGGTGGTGCACTTTTGAGGAATAGAAGATTGGAGAACTTCTTGGGTACAAACTCTGGCCAAAGGGTGGAAGGAACTGTAAAAACTGATGTGAAAAATGAGTCAGAACTAAGGACAGGAAAGGATGTGTACATAGATGATGATGGCTGGGTTTCAGTAATCATATCTTGGATCAGAATTGTCACATGTTTTGTGTCTATGATGGTCACAACTTTCGTATGGGCATTGATCATGGTTGTGCTTATTCCATGGCCCTATGAGAGGATTAGGCAAGGAAACATTTATGGGCATGTCACTGGTAGAATGCTGATGTGGATTCTCGGTAATCCTATAAAGATTGAAGGTGCTGAGTACGGTAAAGAGAGGGCCATTTACATCAGTAACCATGCATCTCCAATAGATATATTTCTTATAATGTGGTTAACTCCTACAGGCACTGTTGGCATTGCTAAGAAGGAGATAATATGGTATCCTCTATTTGGACAACTTTATGTTTTGGCCAACCATCTTCGTATCGATCGTTCTAACGCAACTGCAGCTATCGAATCCATGAAAGAGGCAGCTCGTGCAGTTGTGAAAAACAATCTGTCCCTGATCATTTTCCCAGAGGGTACCAGGTCTAAGACTGGACGACTACTTCCTTTCAAAAAAGGTTTTGTTCATTTAGCACTGCAAACGCGTCTTCCAATTGTCCCAGTGGTCATGACAGGTACTCATCTAGCATGGAGGAATGGAGGCTTACATGTTCGACCAACACCTCTCGCCGTCAAGTATCTCCCTCCCATAAGTACTGAAAATTGGAAGGTTGACAAGGTTGGTGACTATGTCAAGTTGTTGCATAACTTGTATGCTGAACACCTTCCTGAGACTCAAAGGCCTCTGCCTTGA 900 0.4278 MENSGGGALLRNRRLENFLGTNSGQRVEGTVKTDVKNESELRTGKDVYIDDDGWVSVIISWIRIVTCFVSMMVTTFVWALIMVVLIPWPYERIRQGNIYGHVTGRMLMWILGNPIKIEGAEYGKERAIYISNHASPIDIFLIMWLTPTGTVGIAKKEIIWYPLFGQLYVLANHLRIDRSNATAAIESMKEAARAVVKNNLSLIIFPEGTRSKTGRLLPFKKGFVHLALQTRLPIVPVVMTGTHLAWRNGGLHVRPTPLAVKYLPPISTENWKVDKVGDYVKLLHNLYAEHLPETQRPLP 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0088 299 SMART plsc_2 127 242 IPR002123 GO:0016746
Lal22g0088 299 Pfam Acyltransferase 117 239 IPR002123 GO:0016746
Lal22g0088 299 TIGRFAM AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 124 239 IPR004552 GO:0003841|GO:0008654|GO:0016020
Lal22g0088 299 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE ALPHA 54 295 - -
Lal22g0088 299 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 54 295 - -
Lal22g0088 299 CDD LPLAT_AGPAT-like 105 275 - -
Lal22g0088 299 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 56 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0088 Lal-Chr22 548134 549842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0088 64 242 Acyl Lipid Metabolism Gene Families AT4G30580 30.688 4.90e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0088 K13509 - pvu:PHAVU_006G042300g 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0088 22 548134 549842 Lal22g0088 22 548134 549842 ECH