Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0087 ATGAGTGTTGTGGGTTTTGACATTGGAAATGAAAATTGTGTCATTGCTGTAGTCAAACAACGTGGGGTTGATGTTTTGTTGAACGATGAATCCGAACGTGAAACCCCTTCTGTGGTTTGCTTTGGAGAAAAGCAACGTTTTTTGGGGTCGGCCGGTGCTGCTTCTGCTATGATGCATCCCAATTCCACAATATCTCAAGTGAAGAGACTGATAGGCAGGAAATTTTCGGATCCTGAGGTTCAAAATGAGTTGAAAATGCTTCCAGTTGAAACCTCTGAAAGCCTGGATGGTGGCATTTTGATTCACTTGAAATACTTGAAGGAGACTCATACATTTACTCCGGTTCAAATTCTAGCAATGCTCTTTGCTCACTTGAAGACTACAGCTGAAAAGGATTTGGGGACCGCTGTTACGGATTGTGTTATTGGGGTTCCATCATACTTTACTGACTTGCAAAGACGGGCATATCTTACTGCAGCATCAATTGCTGGGTTGAAGCCTTTGAGATTGATTCATGATTGTACTGCAATTGGTCTTGGTTATGGAATTTACAAAACAGATTTTCCCAGCAAGGTTTTAGTTGTTGCATTTATTGATATAGGAGAGTGTGATACTCAGGTTTCTATTGCAGCATTTCAGGCTGGGAAAATGATGATACTGTCACATGCTTTTGACAGGAGCTTAGGGGGGAGAGACTTTGATGAGCTTCTAATCGGTCATTTTGCAGCAAAATTCAAGGATCAGTATAGCATTGATGTGTATTGTAGTGCCAAGGCATGCACTAGGCTGCGTGCAGCATGTGAGAAGTTAAAGAAAGTTTTGAGCGCAAACTCAGAGGCGCATCTGAACATTGAGTGCCTAATGGATGAAAAAGATGTTAAGGGCATTATCAAGAGGGAAGAATTTGAGAATCTGGCATCAGGACTATTGGAGAGAATATGTATTCCCTGCAACAAGGCTTTAGCTGATGCAGGCTTGACCGCAGAAAAGATTAATTCTGTTGAGCTTGTTGGTTCAGGTTCAAGGATTCCTGCAATATGTAGATTATTAACTTCTCTATTCAAGAGAGAACCGAGCCGAACACTGAATGCAAGTGAGTGTGTAGGTCGTGGTTGTGCTCTGCAGTGTGCAATGCTTAGTCCTGTTTTCCATGTCAAAGAATATGAGGTCCGGGATTCTATCCCTTTTTCTATTAGACTTTCATCAGATGAAAGTCCAATTTGTGCAGGATCTAATGGTGTAATTTTCCCTAAAGGACAACCCATTCCAAGTGTTAAAAACTTAACATTTCAGTGCAGAAACTTTCTCCATTTGGATGCATCCTATGCTAATCCGGATGAACTACCACTTGGGACATCTCCTAAAATTAGTAGTTTCACGATTGGTCCTTTACATGGATCCCATGGTAGTACGACGGAAGTTATAGTTCGAGTTCAACTAAATTTGCATGGCATTGTCTGTATTGAATCAGCTACACTGATCGAAGATCATGTGGATGATTCAGTTACAGCAGGTGATCATCATTCAAAATTTGAAGCAATGGATGTTGAACCCAATTCTGAGACAGTTGGGAATGTTACTGAAGATTGTGTTAATAGAAAGTGTGGATCTCCATGTTCTTCTGTTGATGGTACAAGAAAAGATAAAGCTAATAGAAGGCTTCATGTAGAAGTGAGTGAGAATATTTACGGTGGAATGACCAAGGATGAGATATTGGAAGCTCATGAAAAGGAACTACAGTTGACTCAGCATGATAGAACAATGGAGCTAACTAAAGACAAGAAGAATTCCTTGGAGGCTTATGTCTATGAAATGAGGCCTAAGCTCTTCAACACGTATCGGAACTATGCGAGTGAGCAAGAGAGGGATGATATATCCAGGGGCCTGCAAGAGACCGAGGAGTGGCTTTATGATGACGGAGAAGATGAAACCCTACATGCATATTCTGCTAAACTAAAGGATCTAAAACAGCTGGTAGGTCCAATTGAGAATAGGTATAAAGATGAAGAAGCAAGAGCCCAAGCTACAAGAGATTTATTAAGTTCAATTGTAGAGCACCGCATGTGCGCAGGTTCCATTCCACTCCAAAATAAAGAACAGATCATCGATGAGTGCAATAAAGCAGAGCAGTGGCTAAGAGAAAAGATGCAGCAACAAGATTCTTTGCCCAAGTGTTCTGACCCAGTATTTTGGTCAACTGATATCCAGAGCAAGAGAGAAGAGTTAAACATGGTGTGCCAACAAATATTGGGATCTAACTGTTCTCCAGCTTCACAAGACGTGCATAATACTTCTCATCATCAACGATGA 2310 0.4108 MSVVGFDIGNENCVIAVVKQRGVDVLLNDESERETPSVVCFGEKQRFLGSAGAASAMMHPNSTISQVKRLIGRKFSDPEVQNELKMLPVETSESLDGGILIHLKYLKETHTFTPVQILAMLFAHLKTTAEKDLGTAVTDCVIGVPSYFTDLQRRAYLTAASIAGLKPLRLIHDCTAIGLGYGIYKTDFPSKVLVVAFIDIGECDTQVSIAAFQAGKMMILSHAFDRSLGGRDFDELLIGHFAAKFKDQYSIDVYCSAKACTRLRAACEKLKKVLSANSEAHLNIECLMDEKDVKGIIKREEFENLASGLLERICIPCNKALADAGLTAEKINSVELVGSGSRIPAICRLLTSLFKREPSRTLNASECVGRGCALQCAMLSPVFHVKEYEVRDSIPFSIRLSSDESPICAGSNGVIFPKGQPIPSVKNLTFQCRNFLHLDASYANPDELPLGTSPKISSFTIGPLHGSHGSTTEVIVRVQLNLHGIVCIESATLIEDHVDDSVTAGDHHSKFEAMDVEPNSETVGNVTEDCVNRKCGSPCSSVDGTRKDKANRRLHVEVSENIYGGMTKDEILEAHEKELQLTQHDRTMELTKDKKNSLEAYVYEMRPKLFNTYRNYASEQERDDISRGLQETEEWLYDDGEDETLHAYSAKLKDLKQLVGPIENRYKDEEARAQATRDLLSSIVEHRMCAGSIPLQNKEQIIDECNKAEQWLREKMQQQDSLPKCSDPVFWSTDIQSKREELNMVCQQILGSNCSPASQDVHNTSHHQR 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0087 769 Gene3D Actin; Chain A, domain 4 229 312 - -
Lal22g0087 769 Gene3D - 186 359 - -
Lal22g0087 769 Gene3D - 5 373 - -
Lal22g0087 769 PRINTS 70kDa heat shock protein signature 2 15 - -
Lal22g0087 769 PRINTS 70kDa heat shock protein signature 30 42 - -
Lal22g0087 769 PRINTS 70kDa heat shock protein signature 140 160 - -
Lal22g0087 769 PRINTS 70kDa heat shock protein signature 331 347 - -
Lal22g0087 769 PRINTS 70kDa heat shock protein signature 362 382 - -
Lal22g0087 769 CDD HSPA4_like_NDB 2 380 - -
Lal22g0087 769 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 383 599 IPR029047 -
Lal22g0087 769 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 386 531 IPR029047 -
Lal22g0087 769 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 768 - -
Lal22g0087 769 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 568 666 IPR029048 -
Lal22g0087 769 Pfam Hsp70 protein 3 666 IPR013126 GO:0005524|GO:0140662
Lal22g0087 769 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Lal22g0087 769 Gene3D - 38 113 - -
Lal22g0087 769 Gene3D - 566 678 IPR029048 -
Lal22g0087 769 SUPERFAMILY Actin-like ATPase domain 195 379 IPR043129 -
Lal22g0087 769 PANTHER HSC70CB, ISOFORM G-RELATED 1 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0087 Lal-Chr22 542485 546924 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0087 2 430 Miscellaneous Gene Families AT5G42020 34.642 2.98e-74 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0087 K09489 - gmx:100795914 1162.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0087 22 542485 546924 Lal22g0087 22 542485 546924 ECH