Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0082 ATGGCATATTTGTGTGGTTCCAAGTCTTTTGTGATTCCGGCAGTGACTGACAACAGAGTCTCTTCATTTGAGGGAGTTGGTTGCTTTTCCTTTTCCAACACATCCAAACGGTCTTCCCCTTTCACTTGCTTAAGCATCTCCTCTCACGCTGTTATAAAGGAAGTTGTTCAAACTGAAAAGGCCCCTGCAGCATTGGGTCCATATTCTCAAGCAATCAAATCCAACAACCTTCTTTTTGTCTCCGGTGTTCTTGGCCTTCTTCCTCAGACTGGGAAGTTCATCTCTGATAACGTTGAAGATCAAACAGAGCAGCTTCTAAAAAATGCAGGAGAAATCCTTAAAGCTGGTGGTGCTAGCTACTCATCGGTTGTTAAAACAACAATTCTGTTGGCTGACTTGAAGGACTTTAAGATAGTCAATGAGATCTATGCTAAATACTTCCCTTCACCTGCCCCTGCTCGTGCAACATATCAAGTTGCTGCGTTGCCAATGGATGCCAAGATTGAAATTGAGTTCATAGCAGCACTATAA 531 0.4294 MAYLCGSKSFVIPAVTDNRVSSFEGVGCFSFSNTSKRSSPFTCLSISSHAVIKEVVQTEKAPAALGPYSQAIKSNNLLFVSGVLGLLPQTGKFISDNVEDQTEQLLKNAGEILKAGGASYSSVVKTTILLADLKDFKIVNEIYAKYFPSPAPARATYQVAALPMDAKIEIEFIAAL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0082 176 Gene3D - 47 175 IPR035959 -
Lal22g0082 176 Pfam Endoribonuclease L-PSP 59 175 IPR006175 -
Lal22g0082 176 TIGRFAM TIGR00004: reactive intermediate/imine deaminase 53 175 IPR006056 -
Lal22g0082 176 ProSitePatterns Uncharacterized protein family UPF0076 signature. 152 170 IPR019897 -
Lal22g0082 176 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 22 176 IPR006175 -
Lal22g0082 176 PANTHER BNAA05G36080D PROTEIN 22 176 - -
Lal22g0082 176 CDD YjgF_YER057c_UK114_family 68 174 - -
Lal22g0082 176 SUPERFAMILY YjgF-like 53 176 IPR035959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0082 Lal-Chr22 518482 520684 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0082 K09022 - gmx:100527559 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0082 22 518482 520684 Lal22g0082 22 518482 520684 ECH