Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0047 ATGGGTGAAGAGGAATCAGCTAATGTTGTTTCCAATACTGACTCAAATGTCAATAGTTTAGCAGGGAAAACTTTAAATGATGTGAGTGAGAAGGACTTGGAAGCTGGTCAAGGAAAAACCTTAGGGGATGATGGAGTCAAAGACTTGAAAGAGGATAGCGTAACAGAAATGGAAGAAGATAAAAAAGGTGATGGTGATGGTGAGGAAGAAGTAGAGGGGAATAAGAAAGTTGACGGCGGGGAGGAAGTAAAAGAGGACAGGGAAGTTTATCATGTGGAAGGAAAAGAAGAGGGTAAGAAAGATGTTAATGTATCTGAGAATGAAAAGCTGAATGAAGAAACTGAGGTTAAGGAAACGGTGGATAGTAAAGAAGAGAACGGAAATATAGAAGCTAAGAGACCAGAATTGGATGTGACAGAAGCAGTGGGTGTCTATAAAGGTAAAGATGAAAGCAGTGAAAAGGAGAAAATTCAAGAAGAAGAAAAGGACGTGGATAAGGTTGGTAAGGCAACAGAAGAAGAGAAGATAGAAGATAGTGAGATTGAGGAAGGATTGGAAAAGTTTGGGAAAGGGAAGAACATCAGGGAGAGGGTGAAAAATAAAAGAAAGCAAACTGTGGATAGTAAAGGAGAAAAGGAAAATGTAGATGCCAAGAAACCAGAAGTGTGTTCCATGGAAGAAGTGTCTGTCCCTAAATACAAAGATGAGACCATGGAAAAGAAGAAAATTCAAGATGAGAAAGATGAGGATAAGATTAATATGTCAAAAGGAGAAGAAAATGTAGATGATGGTACGGTTGAGAAAGGATTGAAAAAGCGTGGGAAAGGGAAGATCAATGTAGAGAAGGTGAAAAGGAAAAGGAAGGAAATTGTGAACAGTGAAAAGCAAAGTGTAGAAGCTAAGAATCCAGAATTGGATTCTATGGAAGAAGAGGGTGCCTCTAAAGACAAAAATGAGAGCAGTGAAAAGGAGAAAATTCAAGAAGAGAAGGAGCAGGATGAGGAGAAAGCATCGAAAAAGCGTGGGAAAGGGAAGATTGATGGAGAGAAGGTGTGGAAGAAAAAAAAGGAATTTAAGGAGACTGAGCCAAGGACTCCTGCTATCAGTCGCCCTGTGCGGGAGAGGAAAACAGTTGAGAGGTTGGTTGCTTTAATTGAAAATGATGCAAACAAGGAACTTCACATTGCTAAGGGTCGTGGCACTCCTTTAAAAGATATACCCAATGTGACATTTAAATTATCTAGAAGGAAGACAGATGATACTTTAAAATTGCTCCATACAGTTCTCTTTGGTAGGAGAGGGAAGGCGATTCAGGTCAAGAGTAATATATCAAGATTTTCTGGATTTGTGTGGCTTGAAAATGAGGAAAAGCAAATGATTAAAGTGAAAGAAAAACTTGACAAGTGCAATAAAGAGAAGTTACTGGAATTCTGTGATGTGCTTGACATACAAATTGCCAGGGCAGCGGCTAGGAAGATTCCGTTTCAAAAAGTGGTCATTTTCCCTATAAATTCTATCTTCGGAAGATGGGGACGGATACCTGTTTGCTTGATACCAATTAATGTCTCTGTTGTTCCTCATGCTAATAATCTTCAACATAAGCAGGAAGATATTATTACAAAGCTGATAGACTTTTTGGTTGCCCCTCAAGTGACAACAACTGTTCTTGCAGAAAAGGTGAAGTTAATTAAGGGTAAAAAGCGCAAGCGCACAGCAAATCGGTCATCAAGATCTGCAACATCATCAGGACGTTCTGCTAAGAATCTGAAGAAAACTGAGGGTTCTTCAGTATCATTGGAGAGAAAGAGTACAATCGACACAGAAGATGAGTCAGAGGAAGAAGGGAAAGATGAAGAACCGGAGAAAAATGACAATGGTGTTCCTGACAAGTCAGAGGATGAGATACCAGAGAATTCTGAAAGTGAGGAGAAAGGCAATTCTGATAATGAATCTGAAGAGGTGAAGAAACCAGGAAAAATTATTAAAGCATCGTCATCAACAAAGAAAGAATCCTCTGCAAAAAGTGAGATACCACCAGATACAGCCATAACAAAACCTCGCTCAGCACCAAAGAGAACTTCTAAAAAATCATCTGTTACCCACACAGAGGTTGATAATGATAGTGAAGCGAACCCAAAGGTCTCTTCAAGAAAGAAAAAAATTGAAAAAAGAGAAAAGCAGAAGAGCTCATCTCTGAATAAATCTTCCTCCAAAGAGAAAACAGAAAATGTTACTAAAGGAAAGGGCAAGAGAAAAGAAAAGGTGTACCCAAGTGATGATCAGTTACGTGATGCAATATGCAAAGTTCTTAAGGAAGTTGACTTCAATACAGCTACATTTACTGACATTCTGAAGCAACTTGGTAAGCAATTTGATGTGGATCTGACTGCAAGAAAGGCAACTATAAAGATCATTATTCAGGAAGAGCTGACGAAACTAGCTGATGAAGCAGATGATGAAGAGGATGAGGATGCCGAGGATGCGGAGTATGCTGAAGCTTGA 2502 0.3925 MGEEESANVVSNTDSNVNSLAGKTLNDVSEKDLEAGQGKTLGDDGVKDLKEDSVTEMEEDKKGDGDGEEEVEGNKKVDGGEEVKEDREVYHVEGKEEGKKDVNVSENEKLNEETEVKETVDSKEENGNIEAKRPELDVTEAVGVYKGKDESSEKEKIQEEEKDVDKVGKATEEEKIEDSEIEEGLEKFGKGKNIRERVKNKRKQTVDSKGEKENVDAKKPEVCSMEEVSVPKYKDETMEKKKIQDEKDEDKINMSKGEENVDDGTVEKGLKKRGKGKINVEKVKRKRKEIVNSEKQSVEAKNPELDSMEEEGASKDKNESSEKEKIQEEKEQDEEKASKKRGKGKIDGEKVWKKKKEFKETEPRTPAISRPVRERKTVERLVALIENDANKELHIAKGRGTPLKDIPNVTFKLSRRKTDDTLKLLHTVLFGRRGKAIQVKSNISRFSGFVWLENEEKQMIKVKEKLDKCNKEKLLEFCDVLDIQIARAAARKIPFQKVVIFPINSIFGRWGRIPVCLIPINVSVVPHANNLQHKQEDIITKLIDFLVAPQVTTTVLAEKVKLIKGKKRKRTANRSSRSATSSGRSAKNLKKTEGSSVSLERKSTIDTEDESEEEGKDEEPEKNDNGVPDKSEDEIPENSESEEKGNSDNESEEVKKPGKIIKASSSTKKESSAKSEIPPDTAITKPRSAPKRTSKKSSVTHTEVDNDSEANPKVSSRKKKIEKREKQKSSSLNKSSSKEKTENVTKGKGKRKEKVYPSDDQLRDAICKVLKEVDFNTATFTDILKQLGKQFDVDLTARKATIKIIIQEELTKLADEADDEEDEDAEDAEYAEA 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0047 833 MobiDBLite consensus disorder prediction 567 758 - -
Lal22g0047 833 MobiDBLite consensus disorder prediction 640 659 - -
Lal22g0047 833 MobiDBLite consensus disorder prediction 1 25 - -
Lal22g0047 833 MobiDBLite consensus disorder prediction 620 634 - -
Lal22g0047 833 Gene3D - 748 812 - -
Lal22g0047 833 MobiDBLite consensus disorder prediction 575 593 - -
Lal22g0047 833 MobiDBLite consensus disorder prediction 594 609 - -
Lal22g0047 833 Pfam DEK C terminal domain 757 810 IPR014876 -
Lal22g0047 833 MobiDBLite consensus disorder prediction 27 193 - -
Lal22g0047 833 MobiDBLite consensus disorder prediction 1 348 - -
Lal22g0047 833 MobiDBLite consensus disorder prediction 200 276 - -
Lal22g0047 833 Coils Coil 803 823 - -
Lal22g0047 833 PANTHER DEK PROTEIN 296 828 IPR044198 GO:0003677|GO:0006325
Lal22g0047 833 MobiDBLite consensus disorder prediction 725 758 - -
Lal22g0047 833 Coils Coil 316 343 - -
Lal22g0047 833 MobiDBLite consensus disorder prediction 283 348 - -
Lal22g0047 833 Coils Coil 452 472 - -
Lal22g0047 833 MobiDBLite consensus disorder prediction 696 718 - -
Lal22g0047 833 SUPERFAMILY DEK C-terminal domain 751 810 - -
Lal22g0047 833 MobiDBLite consensus disorder prediction 814 833 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0047 Lal-Chr22 281081 291234 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0047 K17046 - gmx:100812631 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0047 22 281081 291234 Lal22g0047 22 281081 291234 ECH