Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0042 ATGGTTAGTATGGGGTGGTTTGACTCACTGTGGGGAGAAGAAGGACGAAAACTCATTAAAAGGAAGGACAGTGATGCTGGCGAAGCGGGTAGAGCATTGGAAGAGCTGAGAGCTTCACTCTACAATGAGCTCCGAACCTCAGAAGGAGCCAAACGCCAACAACAAAGATATTGTCCACCAGTGGTGGCATTGACCTTCAACTTTATGGTTGCAGTTGGGATCATCATGGCAAACAAATTGGTGATGGGGAAAGTTGGCTTCAACTTCCCTATTTTCCTCACATTTGTTCATTACATTACTGCATGGATTCTCTTAGCCATTTTCAAGGCACTCTCTTTGCTTCCTGTCTCCCCTCTAGCTAAAACAACTCCATTCTCTTCTCTATTTGCACTTGGAGCTGTCATGGCTTTTGCTTCTGGTCTTGCAAACACCAGCCTCAAGTATAACAGTGTTGGTTTCTACCAAATGGCTAAGATTGCTGTCACCCCAACAATTGTTCTTGCAGAGTTCATACTCTTTAGAAAAACAATTTCCTTTAGAAAGGTTTTAGCTTTGGTTGTGGTATCAGCAGGTGTAGCAGTTGCAACTGTAACAGATATAGAGTTCAATTTATTTGGTGCTGTGGTTGCAATTGTATGGATAATCCCAAGTGCCATAAATAAGATTTTATGGTCTAGTTTACAACAACAAGGAAACTGGACAGCTCTAGGGTTGATGTGGAAGACAACCCCAGTGACAGTATTTTTCCTAGGAGCTTTAATGCCGTGGATAGATCCACCAGGAGTTCTATCCTTCAAGTGGAATGTAAACAACACAAGTGCAATTTTGATATCTGCTTTGCTTGGTTTTCTGTTACAGTGGTCAGGTGCCTTGGCATTGGGGGCAACTTCTGCTACAACTCATGTTGTTTTAGGACAGTTCAAAACCTGTGTCATTCTACTTGGAGGCTATCTAATATTCAACTCAGATCCTGGGATTATGAGCATTGGAGGAGCTGTTGTTGCTCTCTCTGGAATGTCACTTTACACAACATTGACTTTGCAAGAATCTCAGGAAAATAGCAAGCAGCCACTTTTGCCTTCAACAAAGCCAAAATCAACAAATGAACAAGACACCACAACAGATTCAAATGTTAATACTACCACCATTGTTGTCTGA 1158 0.4197 MVSMGWFDSLWGEEGRKLIKRKDSDAGEAGRALEELRASLYNELRTSEGAKRQQQRYCPPVVALTFNFMVAVGIIMANKLVMGKVGFNFPIFLTFVHYITAWILLAIFKALSLLPVSPLAKTTPFSSLFALGAVMAFASGLANTSLKYNSVGFYQMAKIAVTPTIVLAEFILFRKTISFRKVLALVVVSAGVAVATVTDIEFNLFGAVVAIVWIIPSAINKILWSSLQQQGNWTALGLMWKTTPVTVFFLGALMPWIDPPGVLSFKWNVNNTSAILISALLGFLLQWSGALALGATSATTHVVLGQFKTCVILLGGYLIFNSDPGIMSIGGAVVALSGMSLYTTLTLQESQENSKQPLLPSTKPKSTNEQDTTTDSNVNTTTIVV 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0042 385 PANTHER OS06G0297600 PROTEIN 19 365 - -
Lal22g0042 385 MobiDBLite consensus disorder prediction 352 385 - -
Lal22g0042 385 PANTHER SOLUTE CARRIER FAMILY 35 19 365 - -
Lal22g0042 385 Pfam Triose-phosphate Transporter family 65 342 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0042 Lal-Chr22 257203 259442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0042 72 369 Organic Solute Cotransporters AT1G77610 27.778 7.25e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0042 - - lang:109356883 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0042 22 257203 259442 Lal22g0042 22 257203 259442 ECH
Lal22g0042 22 257203 259442 Lal6g0030 6 216890 222784 LSH