Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1384 ATGGGTGGAGTAATGTTTATGGTGTTGCTATGCTGTCTCTCAGCGGTGTGGGTGGTCCAAGGGGAAGACCCTTATCTATTCTTTACATGGAACGTTACCTATGGTACCCTTTCTCCATTGGGTGTACCACAACAAGTGATTCTCATCAATGGCCAATTCCCTGGACCCAATATCAATTCCACCAGCAATAATAACGTTATTATTAATGTATTCAACAATCTTGACGAGCCACTCCTTTTTCATTGGAACGGCATTCAACAAAGGAAGAATTCATGGCAAGATGGGGTTCCTGGAACTACCTGCCCCATTCTCCCGGGAACAAATTTCACCTATAAATTCCAGGTGAAGGACCAAATTGGGAGTTATTTCTATTACCCAAGCACAAGAATGCATAGAGCTTCTGGTGGTTTTGGTGGCCTTCGTGTCAACAGTCGTTTGCTCATTCCTGTCCCTTATCCAGATCCTGAAGATGACTACACTGTCCTCATTGGCGACTGGTATACCAAGAGCCACTCTGCTCTTAGCAAGTTTCTTGATAGTGGTCGCTCACTTGGTAGACCCGAAGGTGTTCTCGTTAATGGAAAGTCAGCTAAAGGTGATGGCAAAGATGAGCCACTCTTCACCATGAAGCCTGAAAAGACCTATAAATACAGAATCTGTAATGTTGGGCTTAAGAATTCCCTCAACTTTAGGATCCAAGACCATCCCATGAAGCTGGTAGAAATGGAAGGCTCCCATGTTGTCCAAAACACTTATGACTCCCTCGATCTCCATGTAGGACAATGCTTTTCTGTCCTTGTGACTGCTGATAAGGAACCAAAAGATTACTACATGGTGGCATCCACACGCTTCACCAAAACAGTTATAACAGGTAAAGGTATCATGCGATATGCTAATGGAAAAGGTCCTGCCTCACCAGAGATCCCAGAGGCTCCTGTTGGCTGGGCTTGGTCTCTTAACCAATTCCGTTCATTCCGTTGGAACCTCACTGCTAGTGCTGCAAGGCCTAATCCACAGGGCTCTTACCATTATGGACAAATCAACATAACTCGCACAATCAAGCTGATCAACACAGTGAGTAGGGGAAGCGATAAACTTCGTTATGCCTTTAATGGTGTCTCACATATTGACACTGAAACTCCACTCAAACTGGCTGAGTACTTTGAAATGGCAGACAAAGTGTTCAAATATAATATCATCTCAGATAGCCCATCTCATGACGTTGGAAACACTTTAACCATACAACCAAATGTCCTTAATATTACATTTCGTACCTTTGTCGAAATCATATTTGAGAATCATGAAAAATCAATCCAGTCATTTCACTTGGATGGTTACTCATTCTTCTTAGTCGCCATAGAGCCAGGGACATGGAGCCCAGAAAAAAGGAAGAACTATAATTTGCTTGATGCAGTAAGTAGACACACTATCCAGGTATTCCCAAAATCATGGGCAGCCATAATGTTGACATTTGATAATGCTGGAATGTGGAACCTGAGATCAGAGCTTGCAGAGAATCGTTACTTGGGACAACAACTCTATATTAGTGTTCAGTCACCTGAGCGTTCTCTTAGAGATGAGTACAACATCCCAGAAGGAGATGCATGTTTGCTTTGCGGTGCAGTCAAGGGTTTACCAAAGAAACAACTGTACTCAGGATTTTAA 1665 0.4306 MGGVMFMVLLCCLSAVWVVQGEDPYLFFTWNVTYGTLSPLGVPQQVILINGQFPGPNINSTSNNNVIINVFNNLDEPLLFHWNGIQQRKNSWQDGVPGTTCPILPGTNFTYKFQVKDQIGSYFYYPSTRMHRASGGFGGLRVNSRLLIPVPYPDPEDDYTVLIGDWYTKSHSALSKFLDSGRSLGRPEGVLVNGKSAKGDGKDEPLFTMKPEKTYKYRICNVGLKNSLNFRIQDHPMKLVEMEGSHVVQNTYDSLDLHVGQCFSVLVTADKEPKDYYMVASTRFTKTVITGKGIMRYANGKGPASPEIPEAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKLINTVSRGSDKLRYAFNGVSHIDTETPLKLAEYFEMADKVFKYNIISDSPSHDVGNTLTIQPNVLNITFRTFVEIIFENHEKSIQSFHLDGYSFFLVAIEPGTWSPEKRKNYNLLDAVSRHTIQVFPKSWAAIMLTFDNAGMWNLRSELAENRYLGQQLYISVQSPERSLRDEYNIPEGDACLLCGAVKGLPKKQLYSGF 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1384 554 Gene3D - 155 335 IPR008972 -
Lal21g1384 554 Pfam Multicopper oxidase 380 519 IPR011706 GO:0005507|GO:0016491
Lal21g1384 554 Pfam Multicopper oxidase 157 298 IPR001117 -
Lal21g1384 554 Gene3D - 345 536 IPR008972 -
Lal21g1384 554 SUPERFAMILY Cupredoxins 20 171 IPR008972 -
Lal21g1384 554 SUPERFAMILY Cupredoxins 153 336 IPR008972 -
Lal21g1384 554 PANTHER L-ASCORBATE OXIDASE-LIKE PROTEIN 3 537 - -
Lal21g1384 554 CDD CuRO_2_AAO_like_1 157 297 IPR034271 -
Lal21g1384 554 Pfam Multicopper oxidase 32 145 IPR011707 GO:0005507
Lal21g1384 554 SUPERFAMILY Cupredoxins 346 542 IPR008972 -
Lal21g1384 554 CDD CuRO_1_AAO_like_1 26 143 IPR034273 GO:0005507
Lal21g1384 554 Gene3D - 26 146 IPR008972 -
Lal21g1384 554 PANTHER MULTI-COPPER OXIDASE 3 537 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1384 Lal-Chr21 17208659 17210407 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1384 K00423 - gmx:100782413 929.087