Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1357 ATGTCTGCTACTGTGGGAGCTGTGTCTTCCACAAAAAAGGATGTTATTTCATGCAACTCTCATTTAGATGAAGAAGAGGTTGAAAACAAAGGAATGAACAACAAGTTTGGTATTGTAATATTACAAGACTGTGATGATGTTGAGACAGAAGAGTTGGAATATGACAAAGAATTGGACCTTGGCCCTCAGGTTTCTCTCAAGGAACAGCTTGAGAAAGATAAGGTATATATGAATCTTGTATCATTATATTTCTTCATCAAACCTATTCAACAATTTTATTATGTATCAAAGGATGATGAAAGTTTGAGGAAATGGAAGGAGCAACTTCTTGGAAGTGTTGATATATCTAATGTTGGAGAAAGTAAAGATCCAGAAGTGAAGATGATGAGTCTGACAATTACATGTTCAGATAGGCCTAACATTGTCCTTCCAATTCCATTTGATATTGATCCTAAGAAGAGTCTCTTCATCCTTAAGGAAGGAAGCACTTGCCGCATGAAATTCACCTTCACTGTCTCAAACAACATAGTTTCTGGTCTCAAATACACTAATGTTGTTTGGAAAACTGGTGTTAGAGTGGACAACAGAAAAAAAATGTTGGGAACTTTTAGCCCACAGGAGGAACCATATACATATGAATTAGAAGAAGAAACAACACCTTGTGGCATCTTTGCAAGGGGAACCTATGCAGCAAGAATTATGTTTGTAGATGATGATAAAAAATGTTACATGGATGCCAGTTACTACTTTGAAATTCAGAAGAATTGGGCAACACCCTTATGA 783 0.3627 MSATVGAVSSTKKDVISCNSHLDEEEVENKGMNNKFGIVILQDCDDVETEELEYDKELDLGPQVSLKEQLEKDKVYMNLVSLYFFIKPIQQFYYVSKDDESLRKWKEQLLGSVDISNVGESKDPEVKMMSLTITCSDRPNIVLPIPFDIDPKKSLFILKEGSTCRMKFTFTVSNNIVSGLKYTNVVWKTGVRVDNRKKMLGTFSPQEEPYTYELEEETTPCGIFARGTYAARIMFVDDDKKCYMDASYYFEIQKNWATPL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1357 260 PRINTS RHO protein GDP dissociation inhibitor signature 176 192 IPR000406 GO:0005094|GO:0005737
Lal21g1357 260 PRINTS RHO protein GDP dissociation inhibitor signature 193 208 IPR000406 GO:0005094|GO:0005737
Lal21g1357 260 PRINTS RHO protein GDP dissociation inhibitor signature 235 252 IPR000406 GO:0005094|GO:0005737
Lal21g1357 260 PANTHER RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED 96 258 - -
Lal21g1357 260 PANTHER RHO PROTEIN GDP-DISSOCIATION INHIBITOR-RELATED 13 75 - -
Lal21g1357 260 Pfam RHO protein GDP dissociation inhibitor 47 255 IPR000406 GO:0005094|GO:0005737
Lal21g1357 260 SUPERFAMILY E set domains 88 256 IPR014756 -
Lal21g1357 260 Gene3D Coagulation Factor XIII, subunit A, domain 1 86 258 IPR024792 -
Lal21g1357 260 PANTHER RHO GDP-DISSOCIATION INHIBITOR 96 258 IPR000406 GO:0005094|GO:0005737
Lal21g1357 260 PANTHER RHO GDP-DISSOCIATION INHIBITOR 13 75 IPR000406 GO:0005094|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1357 Lal-Chr21 16979795 16981511 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1357 K12462 - gmx:100806852 291.582