Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1353 ATGAAGAACAATCAAACTAGAGTCCATAAACTCATTTCCTTGTCCTTCTTTGTTCTCATTGTGTGTGGAACATTAGCCACGGTTAATGGAGCCGTTGATTTAGCCACGAAATGTGGCCAAGTGGTGGAGAAAGTGATTCCATGCTTGAGCTTTGCGACGGGGAAAGCAGCAACACCAACAAAGGAGTGTTGTGATGCAGCTACGGAAATAAAAGAGAGTAATCCACAGTGTTTGTGTTACATCATTCAACAAACTCATAAGGGAAGCCCTCAAAGCAAACAAATGGGGATCCAAGAAGATAAGCTTCTTCAACTTCCTTCTGTTTGTAATGTTAAAAATGCCAGCATCAGCTTGTGCCCTAAACTATTGGGTCTATCTCCAAGTTCACCAGATGCTGCTATCTTTACAAATGCTTCAAAGCTAACACCAACTGCATCAGCACAATCTTCAACTTCCACACCCACCACACAGAGCAAGGATTCTTCCTATGGAAACATGATTAAACCTTCTATGATCACTGATATAATAGTCATGGCTTTGGCTTTTGTTCTCATTGCAATTCCAACCGGATTTGTTAGCATTTACACATAA 591 0.4095 MKNNQTRVHKLISLSFFVLIVCGTLATVNGAVDLATKCGQVVEKVIPCLSFATGKAATPTKECCDAATEIKESNPQCLCYIIQQTHKGSPQSKQMGIQEDKLLQLPSVCNVKNASISLCPKLLGLSPSSPDAAIFTNASKLTPTASAQSSTSTPTTQSKDSSYGNMIKPSMITDIIVMALAFVLIAIPTGFVSIYT 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1353 196 Pfam Probable lipid transfer 27 119 IPR016140 -
Lal21g1353 196 PRINTS Plant phospholipid transfer protein signature 37 53 IPR000528 GO:0006869|GO:0008289
Lal21g1353 196 PRINTS Plant phospholipid transfer protein signature 58 72 IPR000528 GO:0006869|GO:0008289
Lal21g1353 196 PRINTS Plant phospholipid transfer protein signature 96 113 IPR000528 GO:0006869|GO:0008289
Lal21g1353 196 Gene3D - 35 116 IPR036312 -
Lal21g1353 196 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 14 187 - -
Lal21g1353 196 CDD AAI_LTSS 47 111 - -
Lal21g1353 196 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 36 119 IPR036312 -
Lal21g1353 196 SMART aai_6 38 119 IPR016140 -
Lal21g1353 196 MobiDBLite consensus disorder prediction 144 163 - -
Lal21g1353 196 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 14 187 IPR043325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1353 Lal-Chr21 16887389 16890346 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1353 37 184 Acyl Lipid Metabolism Gene Families AT1G27950 50.000 1.12e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1353 - - gmx:100499777 234.187