Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1351 ATGAAAAATAGGTATCCTATGCCAGAGAGAAAATGGTTCCTATGGTTAGCCATAGTGGGCTTGATCGGTGTGGTGTTCTTTATAGCGACCATGATCCCCGATACATTTTGTCCAGAAATCCGAATCCAAACTCGAAATCGTGTATCAGAAGATTACAACCCAACCCCAATCCAATTGAAAGCAATACTCCACTATGCGACCTCGCGTGTGGTTCCCCAACAATCTCTCTCCGAGATTAAGATCAGCTTTGATGTTCTCAAATCCCTTGGTAGACCAAGCAAATTCCTCGTATTTGGTCTTGGCCATGATTCACTTATGTGGGCCTCATTTAATCCACGTGGCACAACGCTATTTCTTGAAGAAGATCCTAAGTGGGTCCAGACTGTTCTCAAAGACGCGCCTAACCTACGCGCGCATACGGTTCGTTATCGCACGCAGCTGCGTGATGCGGACGCGCTTCTCTCCTCGTACCGCTCCGAACCCGCTTGTTTTCCCTCACGCGCTTACTTGCGTGGCAACAGCGCGTGTAAGTTGGCGCTTGATAATCTTCCTGAGGAGGTGTATGAGACGGAGTGGGATTTGATAATGATAGATGCACCCAAAGGGTATTTTGCGGAGGCACCGGGGAGGATGGCGGCGGTGTACTCCGCCGCGGTGATGGCGCGTGGGAGGAAGGGATCAGGTGTGACGCATGTGTTTTTGCATGATGTGGATAGGAAGGTGGAAAAGGCTTATGCGGAAGAGTTTCTTTGTAAGAAGAATTTGGTTAAGAGTGTTGGAAGGTTGTGGCACTTTGAGATACCACCTCAATCCAATGACATTGATGCTCCTAGTTTTTGTTAG 843 0.4852 MKNRYPMPERKWFLWLAIVGLIGVVFFIATMIPDTFCPEIRIQTRNRVSEDYNPTPIQLKAILHYATSRVVPQQSLSEIKISFDVLKSLGRPSKFLVFGLGHDSLMWASFNPRGTTLFLEEDPKWVQTVLKDAPNLRAHTVRYRTQLRDADALLSSYRSEPACFPSRAYLRGNSACKLALDNLPEEVYETEWDLIMIDAPKGYFAEAPGRMAAVYSAAVMARGRKGSGVTHVFLHDVDRKVEKAYAEEFLCKKNLVKSVGRLWHFEIPPQSNDIDAPSFC 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1351 280 PANTHER OS11G0490100 PROTEIN 1 280 IPR006514 GO:0045492
Lal21g1351 280 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 60 280 IPR006514 GO:0045492
Lal21g1351 280 Gene3D Vaccinia Virus protein VP39 69 277 IPR029063 -
Lal21g1351 280 Pfam Polysaccharide biosynthesis 78 265 IPR021148 -
Lal21g1351 280 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 1 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1351 Lal-Chr21 16871373 16872215 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1351 - - gmx:100791951 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1351 21 16871373 16872215 Lal14g1135 14 13510019 13510861 PCT
Lal14g1135 14 13510019 13510861 Lal21g1351 21 16871373 16872215 PCT