Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1345 ATGGCCACCAACGAGGTTGAGAGGAAGAAAAGGCAAGATCTTAAGCATTTGGGGTTTGTAAGGGTAGCTGCAATTCAAGCAATTGTGTTTGTGTCATATGTATATGAATATGCAAAGCAAAATTCTGGGCCTTTGAGATCTGCTGTTGGAACTGTGGAGGGTACTGCTACCACTGTTTTGGGTCCTGTCTATAACAAATTCAAGGGCTTCCCTGATCATGTCCTTGTTTTTGTTGACAACAAGGTGGATAAAGCCATTCACAAATTCAATGAGCATACTCCTTCTTTTGCCAAACATGTTGCAGTACAAGTAAAGGATTTGACTCAGAAAATGGCACAAGAAGCAGGGAAAATAGTAAGTGAGGTTCAATGTGAAGGATCAATAGCAGCTATGTACTATATTGCCACAGAATCAAAGCATTTTGTGGTAATAAACTCAGTGAAGTTATGGAATAGACTTAACCATATTCCACCATTTCATGCATTGGCAGAGATGATAGTTCCTACTATTGCTCATTTGTCTCAAAAGTACAACCTTGTGATCAAGACTATGACTAGAAAGGGTTATACAATCTTTGCTTATTTGCCTTTGATTCCTATTGATGAAATAGCTAAGGCATTTAAGCAAGGTGGAGAAGCAAAAAACCTTAATGGGCATGAAGTAGTTTCTGCTGAAAAGAAATCAGAATGA 690 0.3841 MATNEVERKKRQDLKHLGFVRVAAIQAIVFVSYVYEYAKQNSGPLRSAVGTVEGTATTVLGPVYNKFKGFPDHVLVFVDNKVDKAIHKFNEHTPSFAKHVAVQVKDLTQKMAQEAGKIVSEVQCEGSIAAMYYIATESKHFVVINSVKLWNRLNHIPPFHALAEMIVPTIAHLSQKYNLVIKTMTRKGYTIFAYLPLIPIDEIAKAFKQGGEAKNLNGHEVVSAEKKSE 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1345 229 Pfam Rubber elongation factor protein (REF) 9 209 IPR008802 -
Lal21g1345 229 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 2 228 IPR008802 -
Lal21g1345 229 PANTHER RUBBER ELONGATION FACTOR-RELATED 2 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1345 Lal-Chr21 16840485 16842750 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1345 - - gmx:100816931 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1345 21 16840485 16842750 Lal7g0618 7 13210695 13212557 PCT
Lal7g0618 7 13210695 13212557 Lal21g1345 21 16840485 16842750 PCT