Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1321 ATGTCATCCCACGGCGGCGTTCCATCGGCGGCGGAATCTCTTCCTCCATCATCAGGACGCAGCTCCGAGAAGCTTAGTCTTCCATCACTCCAATCCAAAATGAAATGCGACCCCGAAGGTTACGAATCTGAGTTACTCCTTCTTCGTTCTCAATTCCAATCCTCACTTGAACTCTTTCGCGAACAAGCTAAAATGAGTTTCACTTCCGTTTCTGGTTTCGGTTTTGATACTACTGTTGCTAAAGACCTTAGTGATAGAGTTATGATTCTTTCACACGTTACTCCTTTTTATCCACAACACCTTTCTCATTTCCCTAAACAACTCGCTGATTTGCTTACTGATGCTGCACGCTCTTTGCCTTCCGGGCTTCGATGTGATCTCACGCGCTCTCTCATTTTACTCCTTAATCGGAAGGTCATAGATATTGGTGAAACTCTGTCATTGTTCATGGAGCTTCAAACACTAGGTGATAAAGTGTTAAAGAAGTTGGCGTTTGACCATGTTGTTCACAGCATAAAGCGCATGAACCAAAAGCATAAGAACGAAGCGAAGAACCGAGCACTTCAGAATGTCATGTTTAGGGATTTGAATCAAGAGGATGAAGCACGGGCTAAGATAGCGCTTGTGACTCTGTGTGAGCTTCACCGGAGGAAGGTTTGGTTTGATGATAGAACAGCGAATGCAATTTGCCGTGCTTCCTTACATCCAGCACCGAGGATCATGATAGCGGCATTATCGTTTCTGCTTGATTATGAGAAGATTGAAAATGATGATGATAGTGATGATTCAAGCAGTGATGACGAATCAGCGTCTCCTCAAGTTGTCCTTAATAAGCACACAATTTATAAGGCAAACCACCAAGGAACAACAGCTAGCAAAAAGAAAAAGAAACTAAAACTGCAGCGTGCTATGCGCAGCTTGAAAAAGCAGCAACGCCGATCATCCGAAAAAGGCACAAGCAGTCAGTATTCACCACTTAATCATCTGATTGATCCACAGGGTTTTGCTGAGAGCCTCTTATCTCGTCTTCAGACTTCTAACGAACGATTTGAGGTTAAGATGATGATGTTGAAATTGATTGCTCGAACAGTTGGACTTCACCGGTTAATTTTGTTAAAATTCTATCCATTTGTTCAAAAATACATTCAGCCGCATCAACGTGACGTTATAAATTTGATTGCAGCAGTGGTTCAGGCCTGCCATGATATGGTTCCTCCTGATGCTGTTGAGCCCCTGTTCAAACAAATAGTAAATCAATTTGTACATGATCGCTCACGTCCGGAGGCCATCACTGTTGGACTAAATGCTGTCAGGGAGATATGCATGCGTATGCCATTGTTAATGAATGAAGACTTACTACAAGACCTTGCCTTGTATAAGAAGTCGCATGAGAAGGCAGTTTCAGTAGCAGCTCGATCTCTTATTACCTTATTCCGAGAGGTTTGCCCTTCACTGCTAGTTAAGAAGGACCGTGGGCGTCCTGTTGACCCTACAGCAAGACCAAAGGCCTATGGAGAAGTCGATATTGCGACTGATGTTATTGGTGCTGAGTTGTTGCTGGAAAGTGACAATGATGACGATGAAGAGAGTGGTGATTCTGACGATTCTGAATGCAGTCACACTGACAATGACCAGGAAAATGATCTGATGAGTATCAATGGTGATGAGAACCTGCTAAGCAGTGAAGATATTGGAAGTGATGATGAAGCTGAAAATGATGATGTTGGATCACAAGATGAAGATGAGATCAGTTTTGATGATGAAACTGGTGTTAGTGATGCTGATGATGATGCTGCTGATGAAGAGGGTAGTGAGGTTTCTGAACATGAAGAAGATGATGATGAAAGTGTGGGTACCAACGGTACAAAAGATTCAACAAAGAAAAGGAAGTTTAGTGATTTTAATGATCAACTTATGGCTGGTGATACAAGTCTCCGGGCTTTGAAAAAATTGGCTGGGACAACAGTGGTGAATTCCCTATCGGAATCTACAGACGGTATTCTTTCTAATGAGGACTTCCAGAGAATCAAGGAACTAAAGGCCAAAAAAGAAGCAGAACGTGCAATGGCTCAGCATGGGCTATCGACTTCAGCAGGGTTCAGGATTCCGAACTCTGATCAACTAAGTACAAAGCGAGTGGATGCTGCCACACTTGAAGCTCATGTAAGGAAAAAGATGAGCAAAGATGAAAGATTGGCATTGGTTAAAGAAGGGAGAGAGGATAGAGGAAAATACCAAGCTCGAGCCGCAGTAAAACAGAAAAAGACGGGTGGTCTAAGCAATAAACAAAAGGAACATAAGAAGAAAATGCCTCTGGCTGCAAAGAGAAATAAGGTATCAAGAACAAGGATTGAGAAAAAGAAGAAAAATGCAAGAGCTGGTAAACAATTCAGAGGGAGGAAAGCATGGAAATGA 2415 0.4265 MSSHGGVPSAAESLPPSSGRSSEKLSLPSLQSKMKCDPEGYESELLLLRSQFQSSLELFREQAKMSFTSVSGFGFDTTVAKDLSDRVMILSHVTPFYPQHLSHFPKQLADLLTDAARSLPSGLRCDLTRSLILLLNRKVIDIGETLSLFMELQTLGDKVLKKLAFDHVVHSIKRMNQKHKNEAKNRALQNVMFRDLNQEDEARAKIALVTLCELHRRKVWFDDRTANAICRASLHPAPRIMIAALSFLLDYEKIENDDDSDDSSSDDESASPQVVLNKHTIYKANHQGTTASKKKKKLKLQRAMRSLKKQQRRSSEKGTSSQYSPLNHLIDPQGFAESLLSRLQTSNERFEVKMMMLKLIARTVGLHRLILLKFYPFVQKYIQPHQRDVINLIAAVVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPEAITVGLNAVREICMRMPLLMNEDLLQDLALYKKSHEKAVSVAARSLITLFREVCPSLLVKKDRGRPVDPTARPKAYGEVDIATDVIGAELLLESDNDDDEESGDSDDSECSHTDNDQENDLMSINGDENLLSSEDIGSDDEAENDDVGSQDEDEISFDDETGVSDADDDAADEEGSEVSEHEEDDDESVGTNGTKDSTKKRKFSDFNDQLMAGDTSLRALKKLAGTTVVNSLSESTDGILSNEDFQRIKELKAKKEAERAMAQHGLSTSAGFRIPNSDQLSTKRVDAATLEAHVRKKMSKDERLALVKEGREDRGKYQARAAVKQKKTGGLSNKQKEHKKKMPLAAKRNKVSRTRIEKKKKNARAGKQFRGRKAWK 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1321 804 MobiDBLite consensus disorder prediction 14 29 - -
Lal21g1321 804 PANTHER HSDA/SDA1-RELATED 22 804 IPR027312 GO:0000055|GO:0042273
Lal21g1321 804 MobiDBLite consensus disorder prediction 561 615 - -
Lal21g1321 804 MobiDBLite consensus disorder prediction 616 635 - -
Lal21g1321 804 Pfam NUC130/3NT domain 90 140 IPR012977 -
Lal21g1321 804 Pfam SDA1 448 801 IPR007949 -
Lal21g1321 804 SUPERFAMILY ARM repeat 89 486 IPR016024 -
Lal21g1321 804 MobiDBLite consensus disorder prediction 768 804 - -
Lal21g1321 804 MobiDBLite consensus disorder prediction 736 804 - -
Lal21g1321 804 Coils Coil 293 313 - -
Lal21g1321 804 MobiDBLite consensus disorder prediction 289 308 - -
Lal21g1321 804 PANTHER PROTEIN SDA1 HOMOLOG 22 804 - -
Lal21g1321 804 MobiDBLite consensus disorder prediction 281 327 - -
Lal21g1321 804 MobiDBLite consensus disorder prediction 523 635 - -
Lal21g1321 804 MobiDBLite consensus disorder prediction 1 34 - -
Lal21g1321 804 MobiDBLite consensus disorder prediction 257 276 - -
Lal21g1321 804 MobiDBLite consensus disorder prediction 545 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1321 Lal-Chr21 16583239 16589093 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1321 K14856 - gmx:100816774 1081.24