LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal21g1313	ATGACGGCGGTGACGGCGATGGATACGGTGGTGAGACTTCGTGTGATATTCGAGGAGGATAACATGCTAAGCAAATCAAAGAAGAAAGAAGGTTTGAATCGATGTTGGGTTCTTCTGAAACACAAAGAACACTGCACCGTTTCTCATTTTTCATCTCATCTTCTTTCCACTTTCAATCTTCATCGCACTTCTCCCAATGGCATCGTTCTCTCTATGGACGGCTTTGTTTTACCACCTTTTGAGTCAACTTATATTTTTAAGGATAAAGACATTGTGTATGTGCAAAGAAAAGAAAGCATTTCAACTTATGATAATCCTGCATTGTTGCCACGTGCACCTAATGGGGGATCTATTAACCTTCCTAAACTACTTGAAATTGAGGGGTTTCAAGGGGAGGATGGACAATGTCAAACCGTGTTGCAAGAGGATGAGAGCGACCAACTTGAAGAAGATGCAGTTAATGTGGAATCTAATGCAAACTCAGAGAAAAGAAAAGCATCAAAGAAGCTCAAGAGCCAAGAGGATGAAAATGACCAACTTGAAGATGACGCAGTTAATGTGGAATCTAATGTAATCTCAAAGAAAAGAAAAGCATCAAAGAAGCTCAAGAGCCAAGAGAATGACTCTGTGCAACTTGAAGACGATGGTGCAGTTTATTCGGAATCTAATGTAAACTCAAAGAAAAGAAAAACATCAAAGAAGTCCAAGAGCCCTAGTAAGAAGAAGATTAAGTTGTCTTCTACTGAAAAGTTGGCAGTCATTCCTGAGGAGGAAGAGGACAATGCAAGTTTTGATGGCCGAATTCATCACCGAAATGTTGTCAAGAAGGACAATGACAAGTCATCTAAATTATCCAGTCAGCCAAAGAAGTCTAGCAACCTTGATCATAAACAAAGTAACAATTCCAGTGGTTCTAAGGGTGACAAAACAAGGTCCCTTCAGCTTCAAGATGATGATGGAACAGAAACTAAAAAGATGCCTAGCAGAAGTACTAGACGGAAGAAGGCTAAGAGAAGATGGTTGAGGGAACAAAAACTGCAGCAGGAGAACGAGAAGTCCCACCCGAGTCCAGTAGTTGAAAAAGATGGTCAACGGTTACCTATCAAAGAAAATAATGGCGTAGTTTCTGACGCACATCAACAAACTGATGAAGACAGTGAAGCAGAGGATGACATTGTTCCTGTGGAAATTAGGCCCGGGCATATTCGCTTTGAACCCCTTAGAAAAGATCAGGAAGTTCAGCAGAATCACTTTCCAGTGGAAATGTTTCAATGGAATGGAACTACCAGCAAGAAGAAGGGACAGAAATGGGGTACAGAGAGGATCTCGTCCCATAAACACGATGACTATGAAGATTCCATTCAAGAGTCTCCCTATGTTCACCATGCGGAAAAGAAACACACACTCAACCCTGTAGATTTTGATAAGCTGACACCTTATACTAGCTCGCCTAAGGAAGGTGACGTAATTTCATATCGATTGATTGAACTATCAGCATCTTGGACGCCAGAGCTTTCTTCTTTCAGAGTTGGGAAAATATTGCATTATGATGCCAAATCAAACAGGATTCAGCTGGAACCAGTTTCAGAACATCCATTTGATTTTAAGAAGAAAATAGATGAGGATGAATCTTCTGAACAGTTTGATCCATCCCCCTATGGGGAAGATGGTTCTTTAGAGATAGATTATTTATCACTTGCTGATGTTCGAATGGTTAAGAATGGAAAGCCAGATTCAGCAACTGTGAATGCTCCTAGTGATGCTTGGGACAACCTAGTAAAAGCAACTAACAGTAGCATTGATGAAAAACTTGTGGATGATCGAACTACTGTGGGGAATTCCAAGCAAAAAAGGAAAGGTCACTCCCCGACTAAAGATAATGGGAAAGTAAATGCGTGGGACGAACTTAACGAGGCATTAGCAGCAAAGAAGGCCAAGTTGTCCAAGGATGATGGCTGGAGTCATGTGAGTTCGGATTCACGGTCATGGTCCCGTAGAGCCTTCAGATGCAGTGCACTGGGTCCAACAATGGCACGTTTAAGGACACAAAATGGATTTAAGTAA	2064	0.4138	MTAVTAMDTVVRLRVIFEEDNMLSKSKKKEGLNRCWVLLKHKEHCTVSHFSSHLLSTFNLHRTSPNGIVLSMDGFVLPPFESTYIFKDKDIVYVQRKESISTYDNPALLPRAPNGGSINLPKLLEIEGFQGEDGQCQTVLQEDESDQLEEDAVNVESNANSEKRKASKKLKSQEDENDQLEDDAVNVESNVISKKRKASKKLKSQENDSVQLEDDGAVYSESNVNSKKRKTSKKSKSPSKKKIKLSSTEKLAVIPEEEEDNASFDGRIHHRNVVKKDNDKSSKLSSQPKKSSNLDHKQSNNSSGSKGDKTRSLQLQDDDGTETKKMPSRSTRRKKAKRRWLREQKLQQENEKSHPSPVVEKDGQRLPIKENNGVVSDAHQQTDEDSEAEDDIVPVEIRPGHIRFEPLRKDQEVQQNHFPVEMFQWNGTTSKKKGQKWGTERISSHKHDDYEDSIQESPYVHHAEKKHTLNPVDFDKLTPYTSSPKEGDVISYRLIELSASWTPELSSFRVGKILHYDAKSNRIQLEPVSEHPFDFKKKIDEDESSEQFDPSPYGEDGSLEIDYLSLADVRMVKNGKPDSATVNAPSDAWDNLVKATNSSIDEKLVDDRTTVGNSKQKRKGHSPTKDNGKVNAWDELNEALAAKKAKLSKDDGWSHVSSDSRSWSRRAFRCSALGPTMARLRTQNGFK	687

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal21g1313	687	MobiDBLite	consensus disorder prediction	537	557	-	-
	Lal21g1313	687	MobiDBLite	consensus disorder prediction	419	433	-	-
	Lal21g1313	687	PANTHER	COILIN	208	685	-	-
	Lal21g1313	687	PANTHER	COILIN	7	214	-	-
	Lal21g1313	687	MobiDBLite	consensus disorder prediction	143	395	-	-
	Lal21g1313	687	MobiDBLite	consensus disorder prediction	419	451	-	-
	Lal21g1313	687	MobiDBLite	consensus disorder prediction	285	310	-	-
	Lal21g1313	687	MobiDBLite	consensus disorder prediction	607	625	-	-
	Lal21g1313	687	MobiDBLite	consensus disorder prediction	188	210	-	-
	Lal21g1313	687	Pfam	Coilin N-terminus	11	202	IPR031722	-
	Lal21g1313	687	MobiDBLite	consensus disorder prediction	342	367	-	-
	Lal21g1313	687	MobiDBLite	consensus disorder prediction	434	451	-	-
	Lal21g1313	687	Coils	Coil	145	215	-	-
	Lal21g1313	687	MobiDBLite	consensus disorder prediction	311	327	-	-
	Lal21g1313	687	MobiDBLite	consensus disorder prediction	607	631	-	-
	Lal21g1313	687	MobiDBLite	consensus disorder prediction	156	176	-	-
	Lal21g1313	687	MobiDBLite	consensus disorder prediction	242	284	-	-
	Lal21g1313	687	PANTHER	COILIN P80	208	685	IPR024822	-
	Lal21g1313	687	PANTHER	COILIN P80	7	214	IPR024822	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal21g1313	Lal-Chr21	16440206	16455296	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal21g1313	K13150		-	gmx:100776892	677.937

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal21g1313	21	16440206	16455296	Lal17g1644	17	17741719	17748239	LSH