Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1282 ATGCGGACGCGCTTCGCGTTACTCTTCTTCTTCTTCACAATGCCTTTTTATTATGCATTGCCGCTTCAGACCACTTTTTCTACAAAGCTACTTCACCGGTTCTCCGATCAATTTAAACCGGTTCGGGTTCAGTCCGGTTCATATTTGAACCGGAAAAAAACCATGAACTACTACCACTTCCTTCTCACTAATGATAACATCAAGCTCGCAAATCGACATCAACTCCTTTTTCCTTCTCGCGGTAGCAAAACGATGTCGTTTGGCAACGACTTTGCATGGTTGCATTATACGTGGATTGATATAGGGACGCCGAGTACTTCGTTTCTTGTGGCTTTAGATGCAGGGAGTGATCTTCTTTGGGTTCCATGTGATTGCATAAAGTGTGCTCCTTTATCTGCAACTTACTATTCCAATTTGGATAGAGATCTGAATGAGTATAGTCCTTCCCGTTCGATATCAAGTAAGCATATATCATGCAGCCATCAGTTATGTGATTTGGGTTCAACTTGTAAAAGTTCCAAGCAGCAGTGTCCATACACAATGAATTACTTATCAGAGAATACATCAAGCTCTGGCTTGTTGGTTGAGGACATATTGCATCTTCAGTCAGGTGGCGAGGGCATATCAAACTCTTCTGTTCAGGCTTCTGTTGTTATCGGTTGTGGTATGAAGCAAAGTGGTGGTTATTTGGATGGGGTTGCTCCAGATGGTGTCATGGGTATGGGACCTGGGGAGAGTTCAGTTCCAAGTCTTCTTGCTAAATCTGGATTAATCCGCAATTCTTTCTCCTTGTGTTTTAATGAAGATGATTCTGGTAGAATATTTTTCGGGGACCAGGGATCAACTATCCAACAGTCTACTGCATTCTTGCCATTGGATGGAATATATTCTACCTACATTATCGGAGTGGACGCATGTTGTGTTGGGAAATCTTGCCTTAAAATGACAAGTTTTAAAGCGCAGGTTGATAGTGGGACATCATTTACATTTCTTCCTGGTCATGTATATGAAGCGATGGCTGAAGAGTTTGATCAACAAGTAAATGCTTCAAGATCTACCTTTGAAGAATCTCCTTGGGAGTATTGTTATACTTGCAGTTCACAAGAGTTGCCAAAGGTCCCCGCCTTGACACTCATGTTCCAACAGAATAACAGTTTTGTCGTATTTAATCCTGTGTTTGTATTCTATGGGAACCAGGGAATCACTGGATTTTGTTTAGCCATACAGCCCGACGATGGGGATATGGGAACAATTGGGCAGAACTTCATGACGGGATACCGGTTGGTATTTGATAGGGAAAACAAGAAGCTAGCCTGGTCAAGTTCAAATTGTGAGGATCTCACTCTAGGTAAGAGTATGCCCGAGTCTCCTCGAAACGAGACATTGACAAACCCATTGCCTACAGATGAGCAACAGAGAATGAACGGGCATGCAGTTGCTCCCTCTGTCGCCGGAAGAGCTCCAAAAAATCCTTCCTCGGCTGCTTCATCTAGGATGATTTCATGCTGCCAGAATTGGTATTGTTATTTGTTTCTTCTATTTCAACTTGTTTCAGCTTTTTCCTGA 1566 0.4266 MRTRFALLFFFFTMPFYYALPLQTTFSTKLLHRFSDQFKPVRVQSGSYLNRKKTMNYYHFLLTNDNIKLANRHQLLFPSRGSKTMSFGNDFAWLHYTWIDIGTPSTSFLVALDAGSDLLWVPCDCIKCAPLSATYYSNLDRDLNEYSPSRSISSKHISCSHQLCDLGSTCKSSKQQCPYTMNYLSENTSSSGLLVEDILHLQSGGEGISNSSVQASVVIGCGMKQSGGYLDGVAPDGVMGMGPGESSVPSLLAKSGLIRNSFSLCFNEDDSGRIFFGDQGSTIQQSTAFLPLDGIYSTYIIGVDACCVGKSCLKMTSFKAQVDSGTSFTFLPGHVYEAMAEEFDQQVNASRSTFEESPWEYCYTCSSQELPKVPALTLMFQQNNSFVVFNPVFVFYGNQGITGFCLAIQPDDGDMGTIGQNFMTGYRLVFDRENKKLAWSSSNCEDLTLGKSMPESPRNETLTNPLPTDEQQRMNGHAVAPSVAGRAPKNPSSAASSRMISCCQNWYCYLFLLFQLVSAFS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1282 521 ProSiteProfiles Peptidase family A1 domain profile. 95 440 IPR033121 -
Lal21g1282 521 Gene3D Acid Proteases 77 278 IPR021109 -
Lal21g1282 521 MobiDBLite consensus disorder prediction 448 490 - -
Lal21g1282 521 PRINTS Pepsin (A1) aspartic protease family signature 101 121 IPR001461 GO:0004190|GO:0006508
Lal21g1282 521 PRINTS Pepsin (A1) aspartic protease family signature 320 331 IPR001461 GO:0004190|GO:0006508
Lal21g1282 521 PRINTS Pepsin (A1) aspartic protease family signature 416 431 IPR001461 GO:0004190|GO:0006508
Lal21g1282 521 Gene3D Acid Proteases 280 446 IPR021109 -
Lal21g1282 521 Pfam Xylanase inhibitor N-terminal 96 278 IPR032861 -
Lal21g1282 521 PANTHER ASPARTYL PROTEASES 14 461 IPR001461 GO:0004190|GO:0006508
Lal21g1282 521 Pfam Xylanase inhibitor C-terminal 318 440 IPR032799 -
Lal21g1282 521 PANTHER ASPARTIC PROTEINASE-LIKE PROTEIN 1 14 461 - -
Lal21g1282 521 MobiDBLite consensus disorder prediction 448 471 - -
Lal21g1282 521 SUPERFAMILY Acid proteases 91 445 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1282 Lal-Chr21 16076920 16082600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1282 88 447 Miscellaneous Gene Families AT1G44130 26.684 1.32e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1282 - - gmx:100782209 796.578