Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1276 ATGAATAATGGAACGATAAGAAGAGTGAATATGAGAGCTCAAATTGATACTTCGCCACCGTTTCAGTCCGTCAAAGAAGCTGTCACACGTTTTGGAGGTACCGCCCCTTCGATACCTCTTTACACCCTTCCACACCCTTTTAACAACAATGAAGATTTGGACATCAAGAAAGTGGAGGAACAAGCAGCAGAGTTGGAAAAAGATTTGATAGTCAAAGAGCTTGAAACACTTGATGTTCTTGAAGAACTAGGAGCTACCAAAAGGATTGTAGAGGACTTAAAGCACCAGATACAAAAAGAAGCATTGAAATGTTTTGCAACACCAGATAAGAGTAATTCTTATGAACAACTTGGAACTCCTGTTATTAAGATGATGAATAAGGAAAATCATAAAGATATTATCAACAACCAAGAACAAATATTAAATGGAATTGAGCCAAACCAAAGGCAAAGCTTAATGGATTTGAACCAAGCCAGAATGAATCTTGGTCAGACTATAAATGAACTCGAGACGATTCAATCTTCTGTTGAATCTTTGCATAAGAAGATAAAGAAGGAGAAAATGTTTCTGGAGAGGACATGTGAAAAGCTCGTATCAAACTTCGCTGCTCAAGGGAAGGCTCAAGAGCAAACAAAATTAAATCCACCTGTATCTCATGTAGAAACAAGTTGCACTTTTGTTAATCCTGCAAACATTGTTAGGAATTTCAATTCTTATTCAGAACAGTATAATGGAATGGTTGAAACAAGATGTGAAGTTTCAAAACCCTTACCTGTGTTGTATGAAGATCATGGATTCAGCATTAAGACTGCTGAGATGAGATGGATTGCTGCTAAAAAAATGGAAGAAGCTGCAAAGGCAGCAGAAGCTATTGCTCTTGCCGAAATTAAAGCTTTATCTAGTTCTGAGAGATCATCGGCTTTTGCCTTGTCGGAACCTCATAAATTCAGTTTTGCTTTGCCCCAAATACCTCAAGAGTCAACCTTGAAGAAGGTGATAGATTCCAAGCTCCAATTTGATGAAACAAGTAATTTCAAATTGACTATTTTGAAGAAGTTGGAGGAAGCATCAGAAGAAGTTCTACACAGCAAACAAGTCTTGAAAGATGCTTTAAACAAAGTTGAGAGTGCAAATAGAAAGCAACATGCCGCTGAGGAGGCTCTAAGGAAATGGATTCCAAAAACATTGTATAACTCTATTGACTACAACTTCAACCAACATAGAAGTTTTCTGGGTTCTCCTCTACAAGATGTAACAAGGTCAACAATATCAACCAATGATCCAAAAAAGCCTGTTTTAAGGTCCACTATTTCAATGAGAGATGTGCTTAGCAGAAAGCAAGTTCCTGAAGAATATGGTACAAGAAAGGAGATGGAAGAGCAGAATGAAAGACAAAAGGTAGCATTGAGTCAAATGCTTAGAGCATTAAGGGATGATCTTACTCTTCAAACAAAGGCTGATAAAGATGGGAGTGATGAAAAGCCATTCATACCACATAGGAAGAAGTTTGGATTCATCCACATATCACTCCCACTGACAAAGCAAAGTAAGAAAAAGACATGA 1563 0.3756 MNNGTIRRVNMRAQIDTSPPFQSVKEAVTRFGGTAPSIPLYTLPHPFNNNEDLDIKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKHQIQKEALKCFATPDKSNSYEQLGTPVIKMMNKENHKDIINNQEQILNGIEPNQRQSLMDLNQARMNLGQTINELETIQSSVESLHKKIKKEKMFLERTCEKLVSNFAAQGKAQEQTKLNPPVSHVETSCTFVNPANIVRNFNSYSEQYNGMVETRCEVSKPLPVLYEDHGFSIKTAEMRWIAAKKMEEAAKAAEAIALAEIKALSSSERSSAFALSEPHKFSFALPQIPQESTLKKVIDSKLQFDETSNFKLTILKKLEEASEEVLHSKQVLKDALNKVESANRKQHAAEEALRKWIPKTLYNSIDYNFNQHRSFLGSPLQDVTRSTISTNDPKKPVLRSTISMRDVLSRKQVPEEYGTRKEMEEQNERQKVALSQMLRALRDDLTLQTKADKDGSDEKPFIPHRKKFGFIHISLPLTKQSKKKT 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1276 520 Coils Coil 455 475 - -
Lal21g1276 520 Coils Coil 350 387 - -
Lal21g1276 520 Pfam Weak chloroplast movement under blue light 13 199 IPR008545 -
Lal21g1276 520 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 3 519 - -
Lal21g1276 520 Coils Coil 48 75 - -
Lal21g1276 520 PANTHER WEB FAMILY PLANT PROTEIN 3 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1276 Lal-Chr21 16000007 16010598 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1276 - - gmx:100776514 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1276 21 16000007 16010598 Lal21g1276 21 16000007 16010598 ECH
Lal21g1276 21 16000007 16010598 Lal6g0210 6 1412102 1418683 PCT
Lal6g0210 6 1412102 1418683 Lal21g1276 21 16000007 16010598 PCT