Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1259 ATGGTTCACTCAACTTCTTCTCTTCTTCACCACAATAACAATCACTTACTCTTTTTTCCTTTCAATTCCAATCCAAACAACACTTCTCATTCCCACACTCTTTCTTTCTTTAAATCTCTTAATTCACCTTCTTCTTATTCTCCATCCTCCACGTCATCATCATCATCATTACCCTACTCGCCCTTATGTTGCCGCGTGGCGCGTGTCTCCACCGAGCATTTAGAGCTATCTCCGCCGCAGCCAGGCTTCAACTTCCGCCGCGAAATTGAGAGGCTCGCCGCGCTACGTGACAAGCTCGCCGCGTGCGACACTCTCGACGAGAAGCTCAGGCTCATCGACGCCGACTCCAGGGTTAGGCGATTCTTCTCCGGTTCCCGCCGAAATCATGCAAAAGCGTTTTCTAGGGTTTTGGCGACCGTTGATTTGGGTAATGAGGAAGTTTTCTGGCTCAAGTGTTTGGTTGCTGCGGGGCAACAACACGTGCTTGAGATTGGAGGAACTGGATTCAATGATTCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTGTGAGCTCGTTGAAAAGTGCGCTTTATTCTTTGGCGGAGATGATTGAAAATTGGGATTCGTATAACAGGAACGGCGGCGGCGGCGGTGGTGGTGGTTTTGGGAAGAATATGGAAATGGCTTTGGCGGATGAAGAAATTCGGGAGTTGAAAAAGTTGTTAGAGTCTTTGGCAGAAATTGAGAGGTTCTATGATTGCATTGGTGGAATTATTGGTTATCAGATGAAAATACTGGAGCTTCTTGTCCAAAAAATGTTTGAGAGGCAGAATATAAACTGGTCTCAGGACAGGCATGGAATGAAAGAATGCCAAATTTCAGGAATTGATGCACCTAAAGGGCTTGACCTTTCTGAAAATACAGAGTATGCATCTCAAGCGGCACTATGGGGTATAGAGGGTTTGCCAGATCTAGGTGAAATTTATCCTTTGGGAGGTTCAGCAGACAGGCTTGGTTTAGTTGATCCTAACACAGGTGAATGCCTTCCTGCTGCAATGCTACCGTATTGTGGTAGGACTTTGTTGGAAGGTCTTATAAGAGATCTTCAGGCTAGAGAGTTCTTATACTTCAAGTTATATGGAAAGCAATGTATCACTCCTGTTGCAATAATGACAAGTTCTGCCAAGAACAACCACAAACACATCACTTCTCTGTGTGAAAGGCTTTCATGGTTTGGAAGAGGTCGATCAACTTTCCAATTTTTTGAACAGCCTCTTGTTCCAGTTGTTGGTGCAGAAGAAGGACAGTGGTTGATCACCAAACCATTCAGTCCCTTGAATAAGCCTGGTGGTCATGGTGTCATATGGAAACTTGCTAATGACAAAGGCATCTTCAAATGGTTTTATAGTCATGGACGAAAAGGTGCAACTGTGCGCCAAGTCAGTAATGTTGTGGCAGCTACAGATTTAACTCTCCTGGCCTTAGCAGGAATTGGTTTACAACAAGGAAAGAAACTGGGGTTTGCGTCTTGTAAGCGGAACTCGGGTGCCACAGAGGGAATTAATGTTCTGATAGAAAAGAAAAGTCCGGATGGGAACTGGGAATATGGTGTCTCTTGCATTGAATACACCGAGTTTGACAAGTTTGGAGTTACTGATGGACCTCTTACTCTTAAAAGTTTGCAGGCAGATTTCCCAGCCAATACAAACATCTTATATGTTGATTTACATTCTGCGGAACTAGTTGGATCAAGTAAGAATGAAAACTGTTTACCAGGAATGGTGATAAATACAAGAAAGCCAATTGTTTATGTAGATCAGTTTGGATTACGCCGTAGTGTCTCTGGTGGCAGACTAGAGTGTACAATGCAAAATATAGCGGACAATTTTTCCAATACATATTCATCTAGGTGTTACAATGGTGTGGAAGATAAGCTAGATACATTTATTGTATATAATGAACGAAGAAGAGTTACCTCATCTGCTAAGAAAAAAAGAAGACATGGAGACAAGTCTTTACATCAGACACCTGATGGCTCCATGTTGGATATCTTACGAAATGCCCATGATCTTCTTTCATGGTGTAATATAAGACTCCCTGAGATTAAAGCTAATGAGAACTATGTTGATTCTGGACCACCATTTCTCATCCTTCTGCATCCTGCTCTTGGTCCTCTTTGGGAAGTCACCAGACAAAAGTTTTATGGTGGTTCCATATCAGAGGGCTCTGAGTTACAAGTAGAGGTTTCAGAGTTCCTTTGGAGAAATGTTCAGTTAAATGGAAGCCTGGTCATAAAAACTGAAAATGTTTTGGGCTCAATGAAGATTAATGAGAGTGGTGAATCCATACTACGTTATGGGCAAAGGTGTGGGAGATGTAGATTGCAAAATGTCAAGGTGCAGAATAAGGGAATTGATTGGACTTATGGTGGAAACATATACTGGAAAAATGATGTGCAGCGGTCTGAGGTTTTGCAGATCATACTGCATGGAAATGCTGAGTTTGATGCCACTGATGTTGTCTTAGAGGGAAATCATGTATTTGAAGTTCCAAATGGCTACAAGATGAAGATCACAGCAGGAAGCCCAGATTTAGAGATACAGTTAGATCCGATTGAGGAGAGGATGGTGGAGAATGGAAGCTGGCACTGGAATTACAAGATAAGAGATTCTCACATTCATATAGAATTAGTAGAATCATAG 2685 0.4246 MVHSTSSLLHHNNNHLLFFPFNSNPNNTSHSHTLSFFKSLNSPSSYSPSSTSSSSSLPYSPLCCRVARVSTEHLELSPPQPGFNFRREIERLAALRDKLAACDTLDEKLRLIDADSRVRRFFSGSRRNHAKAFSRVLATVDLGNEEVFWLKCLVAAGQQHVLEIGGTGFNDSSSSSPSSSSSSVSSLKSALYSLAEMIENWDSYNRNGGGGGGGGFGKNMEMALADEEIRELKKLLESLAEIERFYDCIGGIIGYQMKILELLVQKMFERQNINWSQDRHGMKECQISGIDAPKGLDLSENTEYASQAALWGIEGLPDLGEIYPLGGSADRLGLVDPNTGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHKHITSLCERLSWFGRGRSTFQFFEQPLVPVVGAEEGQWLITKPFSPLNKPGGHGVIWKLANDKGIFKWFYSHGRKGATVRQVSNVVAATDLTLLALAGIGLQQGKKLGFASCKRNSGATEGINVLIEKKSPDGNWEYGVSCIEYTEFDKFGVTDGPLTLKSLQADFPANTNILYVDLHSAELVGSSKNENCLPGMVINTRKPIVYVDQFGLRRSVSGGRLECTMQNIADNFSNTYSSRCYNGVEDKLDTFIVYNERRRVTSSAKKKRRHGDKSLHQTPDGSMLDILRNAHDLLSWCNIRLPEIKANENYVDSGPPFLILLHPALGPLWEVTRQKFYGGSISEGSELQVEVSEFLWRNVQLNGSLVIKTENVLGSMKINESGESILRYGQRCGRCRLQNVKVQNKGIDWTYGGNIYWKNDVQRSEVLQIILHGNAEFDATDVVLEGNHVFEVPNGYKMKITAGSPDLEIQLDPIEERMVENGSWHWNYKIRDSHIHIELVES 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1259 894 Coils Coil 222 245 - -
Lal21g1259 894 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 220 678 IPR029044 -
Lal21g1259 894 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 25 887 IPR039741 -
Lal21g1259 894 SUPERFAMILY Nucleotide-diphospho-sugar transferases 149 763 IPR029044 -
Lal21g1259 894 PANTHER UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 3, CHLOROPLASTIC 25 887 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1259 K22920 - gmx:100788781 1318.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1259 21 15767137 15775335 Lal21g1259 21 15767137 15775335 ECH