Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1188 ATGTTTATTTGTTTTTTCACACAATTTCTCGGGAACGATGATGAAACAAGTTGGCAAATGGATTCTAGTGTTGGAAGAGAGAGAAATAGAGAGATGACAGAGTGGCACTTAGGGAGAAACCAAAAAACATTTCGTCCAAAAAAGAGCGCTCCTTCGGGAAGTAAGGGTGCTAAACTTCAAAAACACATAGATGCTACATTAGGTAGTGGAAACTTGAGGGATGCTGTTAAACTGCCTCCGGGTGAAGATATTAACGAATGGCTAGCTGTAAACGCTGTGGACTTCTTTAATCAAGTGAATATCCTGTTCGGTACACTTACTGAATTTTGTACAGTGAACAACTGTCCGACAATGACTGCAGGACCAAAGTAA 372 0.4032 MFICFFTQFLGNDDETSWQMDSSVGRERNREMTEWHLGRNQKTFRPKKSAPSGSKGAKLQKHIDATLGSGNLRDAVKLPPGEDINEWLAVNAVDFFNQVNILFGTLTEFCTVNNCPTMTAGPK 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1188 123 SUPERFAMILY Mob1/phocein 46 122 IPR036703 -
Lal21g1188 123 SMART Mob1_phocein_2 62 123 IPR005301 -
Lal21g1188 123 Pfam Mob1/phocein family 65 122 IPR005301 -
Lal21g1188 123 PANTHER MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB 35 123 IPR005301 -
Lal21g1188 123 MobiDBLite consensus disorder prediction 37 59 - -
Lal21g1188 123 Gene3D MOB kinase activator 34 123 IPR036703 -
Lal21g1188 123 PANTHER MOB KINASE ACTIVATOR-LIKE 1A 35 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1188 Lal-Chr21 14688646 14691495 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1188 K06685 - csin:114304524 166.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1188 21 14688646 14691495 Lal21g1188 21 14688646 14691495 ECH
Lal17g1497 17 16394963 16398700 Lal21g1188 21 14688646 14691495 LSH
Lal21g1188 21 14688646 14691495 Lal4g1525 4 19359805 19363404 LSH