Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1186 ATGTCATCTTCCAAAACTACCCCTAATAACCGCTCTAAAACTACCCCTCCCTTCCCCGCTTCGCTTCGCCGACGCAGCCTCCGCCTCGCCTCCGTTGACGACGGTTTTTCTTCTCCGACTGCTATTAGGGTTTTCAACCAATCCAACCCTACTCTTTCCGAATCAACGGTTACAAAAAATGTTGATGGAATCGGTGTGTTGAATTTGAGATCAGGAAAAAATGTTCTCAAGAGAGGAATGGATCAACGTAACACTGTTACAAAATCATGTGATGAAGAAGAAATTGGAAATGAGGATTTCGAGAAGGATGATTTGGTTGTGAATGTTGTTGAAGTGAGATTGGGTTCTGAATTTGAAATTAATAAGAGTGTTACTGAGGAATGTGATAATAGTAAGAGAGGCAAAAGAAAATTGAGTGGTGATGTTAGTGGTAATGTGAGTGAAGGATCGAGTCGAAGTCGAAGTCGAAGGAGATTGAGTAGAGAGGAGAAAGGGAAGGTAGTTGTAGTTGATGGTGATTTCGAGGATGTTGTTGTTGGTGGTGGTGAAGGTGAATTAAGCCAAGAGTCTGAAATGAAGGATTTAAATTTGAATTGTATAGAAGATAATGTTGCTTTGCAAGATAGGGAAGAATTGAGGAATTTTGATTGTAAAAATAGTAAGGAGAATGGTTCGAGGAAGAGTGGTCGAAGGAATTTGAGCAAAGAAGAAAAAGGTGAAGCGGTGATGGTTGGTGACAATTTGTCGGGTGATGTTGAAGTTGAATTAGGCGTAGAGTCTGAAATTAAAGATTCAGAAGATAATGTAGACCTGCCAGATAGGGAAGGGTCGATGAATTTTGATTGTAATTCTATGGAGCGTGGTTCGAGGAGGAGTGGTCGAAGGAGTTTGAGCAAAGAAGAAAAAGGTAAAGTGGTGATGGTTGATGGTGATTTGTCGGGTGATGTTGAAGTTGAATTAGGCATAGAGTCTGAAATTAAAGATTCAGAAGATAATGTAGACCCGCCAGATAGGGGAGGATCGAGGAATTTTGATTGCAATACTAAGGAGCTTGGTTCGAGGAGGAGTGGTCGAAGGGGTTTGAGCAAAGAGGAAAAAGGTAAAGCAGTGATGGTTGATGGTGATTTGTCGGGTGATGTTGGTGAAGGTGAATTAGGCATAGAGTTCGAAATTAAAGATTTAGAAGATAATGTAGACTTGCCAGATAGGGAAGGATTGAGGAATTTTGATTGTAATACTAAGGAGAATGGTTCGAGGAGGAGGAGTCGAAGGGGTTTGAGCAAAGAGGAAAAAAGTAAAGCAGTGATGGTTGATGGTGATTTGTCGGGTGATGTTGGTGAAGGTGGATCAGGCATAGAGTATGAAATTAAAGATTTAGATGTTAACCGTTCAGAAGATAATGCAGACTTGCCAGATAGGGAACTGTCGAATACAAGGGATCATGGTTCAAGGAGGAATGTAAACACTAATGCAAGGGAGCATGGTTCAAGGAGGGAACGGTTCCGAGACATAGCGAGGGAAAATGCATCTCGTTTTGCTTATTTTAACTTGGATGGAAGAGATGAAAATCGGCCATCTCCTGAGCGGCCTGAAGTTGAACCTGAAATTGAAGATTGGCCAGGCCCTTTTTCAACAGCTATGAAGATTATTAAGGATCGAATGGTGAAAAGTGTCCAACCTGGAGGTGTCTCGGCTGAAAGAAGTTTGGTTGATTCTATCAAATGGGTTCCTAAGACTGATAAAGGGAATATAGGTTCAAGTTTTTCAGTCCCACCATTGCATGAATTATGCCTTAAGATTCTTGTCAAGAATGTTGATGCAATTGCTTCACTTGATAGTGTTCCAGATGCATTGAGGCACAAGCTTAGCCAGTTGCTATGTGACTCGAGAAAATTAAATGGTCACTTTTTTGAACTTCTTGTTAGTGGATCTCCTACAGAGATTCGGCTAAGAGATTGCTCATGGTTGACAGAGGAACAATTTGCAACATCTTTTCAAATGTCTGACACTGCCAATTTGGTGGTACTGCAACTTGACCAGTGTGGGCGCTGTTTGCCAGATTATGTAGTACTTGCTACTTTGGCACAGTCACCAAGGCATTTACCTAGATTAACTAGTCTATCCCTCAGTGGTGCATGCCGTCTTTCAGATGGGGGGTTGCGTGCACTCGTTTCTTCTGCTCCGGCACTCAGATCAATAAATCTCAGCCTGTGCTCCCTTCTCACATCTTCTAGTGTTTATATTTTGGCTGAGTCATTAAAATCTATGCTGAAAGAGTTGTATCTTGATGATTGCCAAGGCATTGATGCTGGACTAATCGTGCCGGCACTTATAGAGCTTGAACAATTAGAAGTGTTGTCAATGGCAGGTATTCAAACTGTTGGTGATGAATTTGTTAGGGATTACATCATTGCACGTGGTCACAACCTGAAAGAGCTTGTTTTGAAGGACTGTATAAACTTGACTGACTCATCAGTGAAAGTCATTGCTGAACACTGTCTTGGATTATGTGTGCTTGATCTTACGAATTTGTGCAAGTTAACAGATTTATCTATGGGATATCTTACAAATGGTTGTCGGGCACTTCATACACTGAAGCTTTGCCGTAATCCATTCAGTGATGAAGCGATTGCTGCATTCTTGGAGACAAATGGAGAATCCTTGAAAGAACTGTCACTTAATAACATTAAGAAGGTTGGGTACCACTCAACCTTGTCACTTGCAAACCATGCGAAAAGTTTGCATACTCTTGATCTATCTTGGTGCCGAAATTTGACAGACAATGCATTGGGTTTGATTGTTGACAGCTGCTTGTCACTGAGGTTACTTAAACTTTTTGGCTGCACTCAGGTAACAGATGTTTTTGTGAATGGTCACTCAAATCTACATATCCAAATAATTGGGTTGAAAATGTCTCAAGTATTGCAACATGTGAAAGTACCTAATCCTCATCAAGCTGCTTTGAATTATTCATCAGTCTCTCTAAATTTGGCATAA 2997 0.4104 MSSSKTTPNNRSKTTPPFPASLRRRSLRLASVDDGFSSPTAIRVFNQSNPTLSESTVTKNVDGIGVLNLRSGKNVLKRGMDQRNTVTKSCDEEEIGNEDFEKDDLVVNVVEVRLGSEFEINKSVTEECDNSKRGKRKLSGDVSGNVSEGSSRSRSRRRLSREEKGKVVVVDGDFEDVVVGGGEGELSQESEMKDLNLNCIEDNVALQDREELRNFDCKNSKENGSRKSGRRNLSKEEKGEAVMVGDNLSGDVEVELGVESEIKDSEDNVDLPDREGSMNFDCNSMERGSRRSGRRSLSKEEKGKVVMVDGDLSGDVEVELGIESEIKDSEDNVDPPDRGGSRNFDCNTKELGSRRSGRRGLSKEEKGKAVMVDGDLSGDVGEGELGIEFEIKDLEDNVDLPDREGLRNFDCNTKENGSRRRSRRGLSKEEKSKAVMVDGDLSGDVGEGGSGIEYEIKDLDVNRSEDNADLPDRELSNTRDHGSRRNVNTNAREHGSRRERFRDIARENASRFAYFNLDGRDENRPSPERPEVEPEIEDWPGPFSTAMKIIKDRMVKSVQPGGVSAERSLVDSIKWVPKTDKGNIGSSFSVPPLHELCLKILVKNVDAIASLDSVPDALRHKLSQLLCDSRKLNGHFFELLVSGSPTEIRLRDCSWLTEEQFATSFQMSDTANLVVLQLDQCGRCLPDYVVLATLAQSPRHLPRLTSLSLSGACRLSDGGLRALVSSAPALRSINLSLCSLLTSSSVYILAESLKSMLKELYLDDCQGIDAGLIVPALIELEQLEVLSMAGIQTVGDEFVRDYIIARGHNLKELVLKDCINLTDSSVKVIAEHCLGLCVLDLTNLCKLTDLSMGYLTNGCRALHTLKLCRNPFSDEAIAAFLETNGESLKELSLNNIKKVGYHSTLSLANHAKSLHTLDLSWCRNLTDNALGLIVDSCLSLRLLKLFGCTQVTDVFVNGHSNLHIQIIGLKMSQVLQHVKVPNPHQAALNYSSVSLNLA 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1186 998 MobiDBLite consensus disorder prediction 400 437 - -
Lal21g1186 998 SMART LRR_CC_2 911 936 IPR006553 -
Lal21g1186 998 SMART LRR_CC_2 701 726 IPR006553 -
Lal21g1186 998 SMART LRR_CC_2 937 962 IPR006553 -
Lal21g1186 998 SMART LRR_CC_2 807 832 IPR006553 -
Lal21g1186 998 SMART LRR_CC_2 885 910 IPR006553 -
Lal21g1186 998 SMART LRR_CC_2 859 883 IPR006553 -
Lal21g1186 998 SMART LRR_CC_2 727 752 IPR006553 -
Lal21g1186 998 MobiDBLite consensus disorder prediction 517 538 - -
Lal21g1186 998 MobiDBLite consensus disorder prediction 267 303 - -
Lal21g1186 998 Gene3D Ribonuclease Inhibitor 579 802 IPR032675 -
Lal21g1186 998 SUPERFAMILY RNI-like 645 954 - -
Lal21g1186 998 MobiDBLite consensus disorder prediction 1 24 - -
Lal21g1186 998 MobiDBLite consensus disorder prediction 463 498 - -
Lal21g1186 998 MobiDBLite consensus disorder prediction 129 164 - -
Lal21g1186 998 MobiDBLite consensus disorder prediction 218 241 - -
Lal21g1186 998 MobiDBLite consensus disorder prediction 1 19 - -
Lal21g1186 998 MobiDBLite consensus disorder prediction 517 536 - -
Lal21g1186 998 MobiDBLite consensus disorder prediction 348 372 - -
Lal21g1186 998 MobiDBLite consensus disorder prediction 287 303 - -
Lal21g1186 998 PANTHER UNCHARACTERIZED 280 992 - -
Lal21g1186 998 PANTHER F-BOX/LRR PROTEIN 280 992 - -
Lal21g1186 998 MobiDBLite consensus disorder prediction 326 375 - -
Lal21g1186 998 MobiDBLite consensus disorder prediction 400 451 - -
Lal21g1186 998 Gene3D Ribonuclease Inhibitor 804 994 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1186 Lal-Chr21 14676929 14682507 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1186 K15082 - gmx:100808150 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1186 21 14676929 14682507 Lal21g1186 21 14676929 14682507 ECH
Lal14g1650 14 16802123 16807983 Lal21g1186 21 14676929 14682507 PCT
Lal21g1186 21 14676929 14682507 Lal14g1650 14 16802123 16807983 PCT