Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1166 ATGGCTGATTCGGAGGAGAATAGTGCACTGTTCCCAATTTTCATTTTGACAATAATGGCCATCCCCATTGTGCCATATACAATCACAAAGTTATTCCGTGCTATCACTAAAAAATCAAAGAGCATTCACTGTCACTGCTCTGAGTGTACGCGATCGGGGAAGTACCATAAATCGATATTCAAGAGGATTTCGAGTGTCATAACATGTAGTAACTTCACACTGTTACTGCTTTGGGTGGTCATGATCATTATGGTTTATTACATAAAGAATATGAGTAGTGAGATTCAAGCTTTTGATCCATTTAGTATTCTTGGATTGGAACCTGGAGCACTAGAGTCTGAAATAAAGAAAAAATACAGGAGACTTTCTATTCAATACCATCCAGATAAAAATCCAGATCCAGAGGCAAATAAATACTTCGTTGAGTACATTGCCAAGGCGTATCAAGCTCTGACAGATCCAATATCTCGTGAAAATTATGAAAAATATGGTCATCCTGATGGGAGGCAGGGATTTCAAATCGGTATAGCTCTCCCTCAATTTATGACAAATATTGATGGGGCATCGAGTGGAGTACTTCTAATTTTGATTGTTGGTGTGTGTGTTCTCTTGCCGTTGGTTGCTGCTGCTGTTTATCTGTCAAGATCATCAAAGTATAGTGGCAATCATGTGATGCAACAAACCCTTTCCAATTACTATAACCTCATGAAGCCCTCTTTGGCCCCCAACAAAGTAATGGATGTCTTCATAAAGGCTGCTGAATATGCGGAAATTCCAGTTCGTAGGACTGACGATGCGCCTCTCCAGGAGCTTTTTATGTTAGTAAGAAATGAGTTGAATTTTGATCTCAAGAACATTAAGAAGGAGCAGGCTAAGTTTTGGAAGCAGCATCCTGCACTGGTTAAGGCGCAGCTGTTAGTTCTCACTCAGTTGGCCCGTCAGTTTTCAGCTTTATCTCCATCTTTACAAAGTGATTTCAGACAAATTCTAGAAATAGCACCTCGCCTTCTTGAACAATTAATGAAGATGGCAGTTATACCACGCAATAATCAGGGCCATGGGTGGTTGAGGCCTGCCATTGGTGTTGTTGAGCTTTCTCAATGTATCATCCAGGCTGTTCCTTTCAGCGCTAGAAAGAGTATCGGCGGATTATCTGATGGCATTGCACCATTTCTGCAGCTGCCACATATTAATGAGACTGTCATTAAGAAGGTGGCCCCTAAGAAGGTGAGAACAATTCAGGAACTTCTTGAGATGGACTCACAGGAGAGAGCTGACTTGCTTATCCAAACAGCTGGGTTGTCTTCTGCCGAAGTACAAGACGTTGAGGCGGTATTAGATATGATGCCTTCCTTGACACTCGATGTAACTTGCGAGACTGAAGGCGAAGAGGGTATTCAAGAGGGTGACATTGTCACTCTCCATGCATGGGTAAATGTCAAACGAGGTAATGGCCTGATTGGTGCCATTCCGCATGCTCCCTACTACCCGTTCCACAAGGAGGAAAAATTCTGGTTTTTGCTCGCGAATTCTGCTTCGAATAATGTCTGGTTTTCTCAGAAGGTTAGTTTCCTGGATGAAGCTGCGGCTGTATCTGCTGCTTCTCTTGCAATTGAGGAATCCATGGAGGGATCAGGAGGAAGTGGGACAGAGACCAGTAGAGCAGTTGCAGAAGCAGTCGAAAAGGTCAAGAGTGGTTCCAGATTTGTATCGGGAAAGTTCCAGGCCCCATCTGCGGGTACCTACAATTTGACTGGGTATGTTTTGTGTGACTCTTGGTTGGGCTGTGACAGAAACACAAATCTAAAGCTCAAAATTTTGAAACGGACTCGGGCTGGCACCAGGGTTACTGCTTTCGCCGATGAAGGACCTACGGCGGAAGATGGTGTGGAGGAGGATGACGATAGTGTGGATGAAGAGTATGATGAAGAGTATGAGAGCGAGTACAGTGAAGATGAAGACGATCAAAACTCAAAAAATAAGCATCGAGCTGCGAATCGAAATGGCAATAAACGTGGTCAAGCTGCAGAATATTCTAGCTCTGATGAAGAATAA 2055 0.4336 MADSEENSALFPIFILTIMAIPIVPYTITKLFRAITKKSKSIHCHCSECTRSGKYHKSIFKRISSVITCSNFTLLLLWVVMIIMVYYIKNMSSEIQAFDPFSILGLEPGALESEIKKKYRRLSIQYHPDKNPDPEANKYFVEYIAKAYQALTDPISRENYEKYGHPDGRQGFQIGIALPQFMTNIDGASSGVLLILIVGVCVLLPLVAAAVYLSRSSKYSGNHVMQQTLSNYYNLMKPSLAPNKVMDVFIKAAEYAEIPVRRTDDAPLQELFMLVRNELNFDLKNIKKEQAKFWKQHPALVKAQLLVLTQLARQFSALSPSLQSDFRQILEIAPRLLEQLMKMAVIPRNNQGHGWLRPAIGVVELSQCIIQAVPFSARKSIGGLSDGIAPFLQLPHINETVIKKVAPKKVRTIQELLEMDSQERADLLIQTAGLSSAEVQDVEAVLDMMPSLTLDVTCETEGEEGIQEGDIVTLHAWVNVKRGNGLIGAIPHAPYYPFHKEEKFWFLLANSASNNVWFSQKVSFLDEAAAVSAASLAIEESMEGSGGSGTETSRAVAEAVEKVKSGSRFVSGKFQAPSAGTYNLTGYVLCDSWLGCDRNTNLKLKILKRTRAGTRVTAFADEGPTAEDGVEEDDDSVDEEYDEEYESEYSEDEDDQNSKNKHRAANRNGNKRGQAAEYSSSDEE 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1166 684 PANTHER DNAJ PROTEIN ERDJ2-LIKE 1 676 - -
Lal21g1166 684 Gene3D - 226 373 - -
Lal21g1166 684 SMART Sec63_2 209 604 IPR004179 -
Lal21g1166 684 Pfam DnaJ domain 99 161 IPR001623 -
Lal21g1166 684 SUPERFAMILY Chaperone J-domain 96 186 IPR036869 -
Lal21g1166 684 SMART dnaj_3 98 156 IPR001623 -
Lal21g1166 684 Gene3D - 389 448 - -
Lal21g1166 684 MobiDBLite consensus disorder prediction 618 684 - -
Lal21g1166 684 Gene3D DnaJ domain 97 189 IPR036869 -
Lal21g1166 684 MobiDBLite consensus disorder prediction 625 653 - -
Lal21g1166 684 PANTHER SEC63 DOMAIN-CONTAINING 1 676 - -
Lal21g1166 684 Pfam Sec63 Brl domain 224 602 IPR004179 -
Lal21g1166 684 PRINTS DnaJ domain signature 101 119 IPR001623 -
Lal21g1166 684 PRINTS DnaJ domain signature 119 134 IPR001623 -
Lal21g1166 684 PRINTS DnaJ domain signature 136 156 IPR001623 -
Lal21g1166 684 PRINTS DnaJ domain signature 156 175 IPR001623 -
Lal21g1166 684 Gene3D C2 domain 453 613 IPR035892 -
Lal21g1166 684 ProSiteProfiles dnaJ domain profile. 99 164 IPR001623 -
Lal21g1166 684 SUPERFAMILY E set domains 454 608 IPR014756 -
Lal21g1166 684 CDD DnaJ 99 153 IPR001623 -
Lal21g1166 684 SUPERFAMILY Sec63 N-terminal domain-like 244 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1166 Lal-Chr21 14326876 14334288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1166 K09540 - gmx:100809969 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1166 21 14326876 14334288 Lal4g1493 4 19072511 19080177 LSH