Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1165 ATGGCTTCATCATGGAAGAAGACCATCACTACCCCATTCAAAAAAGCTTGCACTTTCTTTAACCCACAATCACCAAGGGGGCATAGGAAGTCTCAAACAGAGCCAGAGAACCATGTAATGGATCTAGAAGGTGAAGTCATGGCATGTGGCTATGAAGATGTTCAAGTTATGTGGTCTATTCTTGATAAGTCCAAATCCACAACATGCAATATAACTTCTTCATAA 225 0.4044 MASSWKKTITTPFKKACTFFNPQSPRGHRKSQTEPENHVMDLEGEVMACGYEDVQVMWSILDKSKSTTCNITSS 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1165 74 PANTHER - 3 74 - -
Lal21g1165 74 PANTHER OS01G0778500 PROTEIN 3 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1165 Lal-Chr21 14323352 14324434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1165 - - gmx:100305862 124.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1458 17 15972747 15973562 Lal21g1165 21 14323352 14324434 LSH
Lal21g1165 21 14323352 14324434 Lal4g1478 4 18920188 18921390 LSH
Lal14g1615 14 16592833 16593535 Lal21g1165 21 14323352 14324434 PCT
Lal7g1019 7 16373611 16374650 Lal21g1165 21 14323352 14324434 PCT
Lal19g1163 19 15134547 15135775 Lal21g1165 21 14323352 14324434 PCT
Lal21g1165 21 14323352 14324434 Lal14g1615 14 16592833 16593535 PCT
Lal21g1165 21 14323352 14324434 Lal7g1019 7 16373611 16374650 PCT
Lal21g1165 21 14323352 14324434 Lal19g1163 19 15134547 15135775 PCT