Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1154 ATGAATACTCCACATAGATTTATGGATCGGGTCGTGGCCCGATCCACTGATCACATGGAGTTGGTGGATATGAAAGCACGAAGCAACAATGAGATGAAAAAGACTCTTAATTGGTGGGACCTTATTTGGTTTGGAGTTGGGGCTGTCATTGGGGCTGGAATATTTGTACTTACTGGACTTGAGACAAGGGAGGTCGCCGGACCCGCTGTGGTGTTGTCCTATGTTGTGTCGGGTATTTCCGCCCTCCTTTCCGTCCTGTGCTACACTGAGTTCGCTGTGGAAATTCCAGTAGCTGGTGGTTCATTTGCATACTTAAGAGTAGAGCTAGGAGACTTTGTGGCCTTCATAACTGCCGAAAACATCCTCCTTGAGTACGTAATAAGTGGCGCAGCCGTAGCTCGGTCATGGACCTCATACTTTGCCACCCTATGCAACAAAAACCCTGATAACTTCCGGATAGTAGTCCATGGCAAGGACCCTAACTATGGTCATCTTGACCCTATAGCAATTGCAGTCCTTACAGTCATAACCACCCTCACAATATTCAGTATCAAAGGCTCTTCAGTCTTCAACTACATTGCCTCAATGATCCACATTTTTGCCATCATCTTCATCATCATAGTTGGTCTAATCAATGCCAATCCTAAAAACTACACACCATTCGCGCCTTTCGGTGTCAGGGGAGTGTTTCAAGCATCAGCTGTGCTAATCTTCGCTTATGTAGGATTCGACGCGGTTTCAACGATGGCTGAAGAGACAAAGAATCCTGCTAGGGACATCCCTATTGGCCTAATAGGCTCAATGGTGATGAACACATTGGCTTATTGTTTGCTAGCAGTAACACTCTGCCTTATGCAGCCATATAACACAATCGATGTCGATGCGCCTTTCTCGGATGGGATTGAGCTAAGTACATTGTGCATTGAAGGGAATGACAACTGTGTTGTTGGTGAGTGTAGTGGTCAAGCTCGATATCTAACTCACATCGCGCGAATTCACATGATGTCGCCTTGGTTTGCTCATGTAAACGAGAAGACAGGAACACCAGTGAATGCTACAATCTCAATGCTTGTAGCTACATTTGTGATTGCATTGTTCACAAATCTTGGTATTCTCTCAAACCTCTTGTCGATTTCGACTCTTTTTATCTTCATGCTTGTGGCAGTTGGACTATTAGTTAGAAGATATTACTCAAGTGGAGAAGGAATCAAATTAAGCTCATTGTGTTCCTTATGCATATTATTGGATCCTCATGTGGAATATCTATTTACTTTGCAAGTAGTGATGGTTGGATTGGTTATGCAATATGTGTGCCAATTTGGGTTATATCTACTATTGGTCTTAGGCTTTTTGTTCCAAAAGCAAAGAAGCCTAAACTTTGGGGGTACCCTTAGTTCCATAGATAAAGATTCTTTCATAAGGTTTGCTATATGGACAGGGTTTCTATTG 1449 0.4327 MNTPHRFMDRVVARSTDHMELVDMKARSNNEMKKTLNWWDLIWFGVGAVIGAGIFVLTGLETREVAGPAVVLSYVVSGISALLSVLCYTEFAVEIPVAGGSFAYLRVELGDFVAFITAENILLEYVISGAAVARSWTSYFATLCNKNPDNFRIVVHGKDPNYGHLDPIAIAVLTVITTLTIFSIKGSSVFNYIASMIHIFAIIFIIIVGLINANPKNYTPFAPFGVRGVFQASAVLIFAYVGFDAVSTMAEETKNPARDIPIGLIGSMVMNTLAYCLLAVTLCLMQPYNTIDVDAPFSDGIELSTLCIEGNDNCVVGECSGQARYLTHIARIHMMSPWFAHVNEKTGTPVNATISMLVATFVIALFTNLGILSNLLSISTLFIFMLVAVGLLVRRYYSSGEGIKLSSLCSLCILLDPHVEYLFTLQVVMVGLVMQYVCQFGLYLLLVLGFLFQKQRSLNFGGTLSSIDKDSFIRFAIWTGFLL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1154 483 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 3 405 - -
Lal21g1154 483 PIRSF AA_transporter 16 304 - -
Lal21g1154 483 PIRSF AA_transporter 313 462 - -
Lal21g1154 483 Pfam Amino acid permease 36 292 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lal21g1154 483 Pfam Amino acid permease 321 401 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lal21g1154 483 Gene3D Amino acid/polyamine transporter I 30 460 - -
Lal21g1154 483 PANTHER CATIONIC AMINO ACID TRANSPORTER 1 3 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1154 Lal-Chr21 14171379 14174161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1154 2 397 Organic Solute Cotransporters AT2G34960 54.926 2.74e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1154 K03294 - gmx:100794163 574.704