Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1126 ATGTTGCATTCTACACTCTCTTCCTCTTTTCACTCCACTACCCTTTCTCCTTCTCCTTCTCTTTCTCTTCTTTCTCCTCTTCATAATTTTCTACCTCTCTCCCATTTCTCATTCCACTCTCAACCTTTTCACTATTACAATATTCATGCCAATACCCATTTTCCTTTAAGACCCAAGGCACTCAAAGTGAATTGTTCCACCAGTGAGCCATTGAAGGTGATGATATCGGGTGCACCTGCATCAGGAAAGGGAACTCAATGTGAATTGATTGTCCATAAGTTTGGTCTGGTGCACATATCAACTGGGGATCTTCTAAGAGCAGAAGTAGCAGCCGGGACAGAAATCGGAAGTAAAGCAAAAGAGTTCATGAATGCTGGTCGCTTGGTTCCTGATGAAATCGTGACAAATATGGTGGCAGCACGATTAGCTCGTGACGATGTAAAACAAAGGGGGTGGCTTCTTGATGGGTACCCTCGAAGTTTGGCCCAAGCCGAGAGTTTGGAAAAAATGCAGATAAGACCTGATTTGTACATTGTATTAAATGTTCCTGATGAAATTCTGATCGACAGATGTGTTGGTAGAAGGCTAGACCCAGTGGAAGGGAAAATATATCATCTAAAGTTTTTCCCACCAGAGACCGAAGAAATCAAAGCAAGGCTGACCACTCGTCCCGATGACACTGAAGAGAAAGTTAAATCACGCCTACAAATATATAAGCAAAATGCAGAAGCGGTATCTTCCACTTACTCAAAGATAACAAATAAGATTGATGGCAGCCATTCAAAAGAAGTAGTTTTCAAAGAAATTGAAACTTTGCTCTCACAATTGCAACAGGAAAAAGTGAAAATAATAAAATCAGAAGAGAAACCAATGCTTGATACGAAGAAGGGGCAGACATCTTCGAGTCAGGATCAATGGAGAGGAATTCCTACTAGATTAAATAACATTCCGCATTCTCGAGAAATCAGGAAATATTTCTACAATGATGTGCTACAAGCTACACAGAGGGCTATCGTTGATGGAAAAACTCGTTTGAGGGTAGACATCAACATTCCTGAACTGAACCCAGAAATGGATGTTTATCGAATAGGTACCTTGATGGAACTTGTTCGAGCTCTTGCCCTTTCATTCGCTGATGATGGAAAACGGGTTAAGGTTTGTGTGCAAGGGTCAATGGGAGAAGGTGCTCTTGCTGGAATGCCATTGCAGCTGGCAGGAACTCGAAAGATTTTAGAGTTCATGGATTGGGGTGATTATGGTGCAAAAGGAAACTTCATCAATATCGGTTCTATAGGTGCTGCAGAAGTTGATGAGCAAGATGACATGTATATCTTGGTTGCTCCTCAAAATGCTGTTGGGAATTGCATTATCGATGATCTAAGAGCCATGACCAATGCTGCTGAACACAGACCAGTTATCCTAATCAATCCCAAGCTTAAGGACTTACCTGCTTCTAGTGGTATTATGCAAACAATGGGGCGGGACGAGAGACTCAAGTATGCAGCTTCATTCGAAAGTTGTTATTTCTTTCGGCTTCTTTATTACGCAGGAACTCAGTATCCTATAATGGGAGCTATAAGGATGTCTTCTCCATACTGTTATGAGCTTTACAAGAGGGTAGATGAGCCATCTGGGAAGGAGAAGTATGTTATTTTGTCAACATTTCCTCATAGGCCTTCCATTGATGAAACCAATGATGCTTTTGAAGGAAAACCAAGTAACGAAACTCGGAAAGCTTCCGGGATTTGGTTAGGGCTTCTTGAGTGGCATATTTTGAAAAGCGCGGAAAGTAGTGCGTATCGTACATTGATTATGCGCAAGATAGAAAATCGGACGAAATTACATCATGTTGAGACATTCCTTGAGATTTGA 1872 0.4145 MLHSTLSSSFHSTTLSPSPSLSLLSPLHNFLPLSHFSFHSQPFHYYNIHANTHFPLRPKALKVNCSTSEPLKVMISGAPASGKGTQCELIVHKFGLVHISTGDLLRAEVAAGTEIGSKAKEFMNAGRLVPDEIVTNMVAARLARDDVKQRGWLLDGYPRSLAQAESLEKMQIRPDLYIVLNVPDEILIDRCVGRRLDPVEGKIYHLKFFPPETEEIKARLTTRPDDTEEKVKSRLQIYKQNAEAVSSTYSKITNKIDGSHSKEVVFKEIETLLSQLQQEKVKIIKSEEKPMLDTKKGQTSSSQDQWRGIPTRLNNIPHSREIRKYFYNDVLQATQRAIVDGKTRLRVDINIPELNPEMDVYRIGTLMELVRALALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGNFINIGSIGAAEVDEQDDMYILVAPQNAVGNCIIDDLRAMTNAAEHRPVILINPKLKDLPASSGIMQTMGRDERLKYAASFESCYFFRLLYYAGTQYPIMGAIRMSSPYCYELYKRVDEPSGKEKYVILSTFPHRPSIDETNDAFEGKPSNETRKASGIWLGLLEWHILKSAESSAYRTLIMRKIENRTKLHHVETFLEI 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1126 623 ProSitePatterns Adenylate kinase signature. 152 163 IPR033690 -
Lal21g1126 623 MobiDBLite consensus disorder prediction 295 312 - -
Lal21g1126 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 275 IPR027417 -
Lal21g1126 623 Gene3D - 66 287 IPR027417 -
Lal21g1126 623 Pfam Domain of unknown function (DUF1995) 323 564 IPR018962 -
Lal21g1126 623 PRINTS Adenylate kinase signature 74 87 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal21g1126 623 PRINTS Adenylate kinase signature 102 116 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal21g1126 623 PRINTS Adenylate kinase signature 152 168 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal21g1126 623 PRINTS Adenylate kinase signature 223 238 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal21g1126 623 PANTHER NUCLEOTIDE KINASE 58 480 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal21g1126 623 PANTHER ADENYLATE KINASE 5, CHLOROPLASTIC 58 480 - -
Lal21g1126 623 CDD ADK 72 265 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lal21g1126 623 TIGRFAM adk: adenylate kinase 72 273 IPR006259 GO:0004017|GO:0005524|GO:0016776
Lal21g1126 623 MobiDBLite consensus disorder prediction 291 312 - -
Lal21g1126 623 Coils Coil 269 289 - -
Lal21g1126 623 Pfam Adenylate kinase 75 251 - -
Lal21g1126 623 Hamap Adenylate kinase [adk]. 71 274 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1126 Lal-Chr21 13816412 13825079 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1126 K00939 - gmx:100818830 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1126 21 13816412 13825079 Lal21g1126 21 13816412 13825079 ECH