Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1058 ATGTCTTCGCTAAATCCACTTTCTCAATTCCAATCCCTTTTTAACAAACCCCTTCTTCTTCCACTTTCTCAATTCCCCTCTTCTTTCATACCCAAAACTTCATTCATACACTTTCATCTTTCTTCTCTTCCTCGTCGAGTTTCAGTTTCAGTGACGCCGATGAATGGTGTTATTGCGTCATCTACCACCGCGGAGAAGTCGAAGAAGCGTAACCCTGGTGAGTCAAAGGGTTTCGTGGAGGAAATGAGATTCGTGGCTATGAAATTGCATACTAAGGATCAAGCTAAGGAGGGTGAGAAAGAGGTTAAAGAACCAGAGGAAAAAACTGTGGCTAAATGGGAACCAAGTGTTGATGGGTATTTGAAGTTCCTTGTTGATAGTAAGTTTGTCTATGATACGCTTGAGAAGATTGTTCAAGAGCCTGCTTATCCTTCATATGCTGAATTCAGAAATACAGGATTGGAAAGGTCTGCAAGTTTAGCAAAAGATTTGGAGTGGTTCAAGGAGCAAGGTCATACAATTCCCGAACCTTCCTCTCCTGGTCTTACATATGCACAATATCTTACCGAGTTATCGCAAAAGGATCCCCAAGCCTTCATTTGCCACTTTTACAACATCTACTTTGCCCATTCAGCTGGTGGTCGAATGATTGGGAAAAAGGTTGCTCAAAAGATACTAAACAACAAGGAGTTGGAGTTCTATAAATGGGATGGGGATCTATCTCAGTTGTTGCAGAATGTGAGGGACAAGTTGAACAAAGTTGCTGAAGAATGGATTCGGGAAGAGAAGGACCACTGTCTGGAAGAAACAGAAAAATCGTTCAAGCTCTCGGGACAGATTCTTCGATTAGTTCTATCATGA 861 0.4181 MSSLNPLSQFQSLFNKPLLLPLSQFPSSFIPKTSFIHFHLSSLPRRVSVSVTPMNGVIASSTTAEKSKKRNPGESKGFVEEMRFVAMKLHTKDQAKEGEKEVKEPEEKTVAKWEPSVDGYLKFLVDSKFVYDTLEKIVQEPAYPSYAEFRNTGLERSASLAKDLEWFKEQGHTIPEPSSPGLTYAQYLTELSQKDPQAFICHFYNIYFAHSAGGRMIGKKVAQKILNNKELEFYKWDGDLSQLLQNVRDKLNKVAEEWIREEKDHCLEETEKSFKLSGQILRLVLS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1058 286 PIRSF Heme_oxygenase_decyc_plant 10 286 IPR016951 -
Lal21g1058 286 PANTHER HEME OXYGENASE 1, CHLOROPLASTIC-RELATED 1 286 IPR016951 -
Lal21g1058 286 Pfam Heme oxygenase 114 282 IPR016053 GO:0004392|GO:0006788
Lal21g1058 286 SUPERFAMILY Heme oxygenase-like 86 283 IPR016084 -
Lal21g1058 286 Gene3D - 65 285 IPR016084 -
Lal21g1058 286 CDD HemeO 77 282 IPR002051 GO:0004392|GO:0006788
Lal21g1058 286 PANTHER BNAC06G17920D PROTEIN 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1058 Lal-Chr21 12609241 12626580 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1058 K21480 - twl:119995936 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1058 21 12609241 12626580 Lal21g1058 21 12609241 12626580 ECH
Lal21g1058 21 12609241 12626580 Lal4g1282 4 16882877 16887566 LSH