Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0834 ATGTCGAAGCTTCTTCTACTTCCATTCACTCCTAATCTCACCTCTTTCCAACGCTCCCATTCACTCTCCTTTTCTTCTCCCATTTCATTTCAATCTCATTTCTCTCTCACTCTTCCTACACACCTTTCCCTTCGTGCCTTCAATTCTTCTTCTCCTTCTTCTTCTGACCCTAAAATCAAGGAAGAAGAAGAAAATGGCATTAACAATCAAAGTGATGAGGATTACCCTAGCGGTGAGTTTGAGTTTGAACCCATATCTGGATGGAGAAACTTTCTTGTTAAACTCAAAATGCTCGTTGCGTTACCCTGGGAGCGGGTTCGCAAGGGTAGCGTCCTCACTATGAAGCTGCGTGGCCAGATATCTGATCAAGTGAAGAGTAGGTTCTCTCCGGGACTTTCTCTACCTCAAATTTGCGAGAATTTTTTGAAAGCAGCATATGATCCTCGCATTTCTGGAATCTATCTCCATATTGACAGTTTAAACTGTGGATGGGGTAAAGTGGAAGAAATTAGAAGGCACATATTGAATTTCAAAAAGTCAGGAAAATTTGTTGTGGCTTATGTCCCTACATGTCAAGAAAAAGAATATTACTTGGCATGTGCATGTGAAGAGATATATGCCCCTCCAAGTGCTTACTTTTCTTTGTTTGGATTGACTGTTCAAGCTTCGTTTTTAAGAGGTGTTTTAGAAAATATAGGAATTGAACCACAGGTGGAAAGGATTGGCAAATACAAAAGTGCAGGGGATCAACTAGCTCGAAGAACCATGTCTGAGGAAAATTGTGAGATGCTCACTGCATTGCTTGATAGCATTTATACAAATTGGTTGGATAAAGTCTCTTCTGCCAAAGGAAAGAGTAGAGAAGATATTGAGAACTTCATAAATGAAGGCATCTACCAAGTAGACCGGCTCAAAAAAGAGGGCTTCATATCAAACATAATCTATGATGATGAGGTTATTTCCCTATTGAAGGAAAGACTTGGAGTGAAAATAGATAAAAAGCTGCCTATGGTTGATTACAGGAAATACTCTCGAGTTAGGAAATGGACAGTTGGAATATCAGGTGGTAAAGATCTGATAGCCATCATCCGAGCTTCAGGAAGCATTAGTCGTGTTGAGAGTCAATTAAGTGTTTCTAGCTCAGGTATCATTGCAGAGAAGTTCATTGAGAAGATTCGAAGTGTCAGAGAATCAAAAAAGTATAAGGCTGCTATCATCCGGATTGACAGTCCTGGAGGTGATGCCCTTGCTTCTGATTTGATGTGGAGAGAAATCCGGCTTTTGGCTGCTTCAAAACCAGTTATTGCTTCGATGTCTGATGTGGCAGCAAGTGGAGGCTACTACATGGCAATGGCAGCTGAAGCTATTGTCGCAGAAAGTCTTACCTTAACTGGTTCTATTGGTGTGGTTACAGGAAAATTTAATCTGGGGAAACTGTATGAGAAGATTGGCTTTAACAAAGAAACCATATCAAGGGGAAGATATGCAGAGCTCTTTGCTGCTGAACAACGTCCTTTTAGACCAGATGAAGCAGAGCTATTTGCCAAGTCTGCACAGAATGCTTATAAACAATTTCGAGATAAGGCGGCTTTATCGAGATCAATGACTGTAGATAAAATGGAGGAGGTAGCACAAGGGAGGGTTTGGACTGGTAAAGATGCAGCTTCTGGTGGTTTGGTTGATGCTATTGGCGGGCTTTCTCGAGCTATAGCCATAGCAAAATTGAAGGCCAAAATACCTCAAGATAGAAAGGTTACTCTTGTCGAGATCTCTCGACCTAGCCCTTCTCTACCAGAGATTTTATTCGGCGTCGGGAACACCTTTGCTGGAGTAGACAGAACATTGAAGGAACTGCTGCAGGGTTTGACCTTTTCTGATGGAGTTCAAGCCCGGATGGATGGGATCATGTTTCAGACATTAGAAGGATATCCTTATGCCAACCCCATTCTGTTAATAATTAAAGACTACCTTAGTTCTTTGTAG 1983 0.4145 MSKLLLLPFTPNLTSFQRSHSLSFSSPISFQSHFSLTLPTHLSLRAFNSSSPSSSDPKIKEEEENGINNQSDEDYPSGEFEFEPISGWRNFLVKLKMLVALPWERVRKGSVLTMKLRGQISDQVKSRFSPGLSLPQICENFLKAAYDPRISGIYLHIDSLNCGWGKVEEIRRHILNFKKSGKFVVAYVPTCQEKEYYLACACEEIYAPPSAYFSLFGLTVQASFLRGVLENIGIEPQVERIGKYKSAGDQLARRTMSEENCEMLTALLDSIYTNWLDKVSSAKGKSREDIENFINEGIYQVDRLKKEGFISNIIYDDEVISLLKERLGVKIDKKLPMVDYRKYSRVRKWTVGISGGKDLIAIIRASGSISRVESQLSVSSSGIIAEKFIEKIRSVRESKKYKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMAAEAIVAESLTLTGSIGVVTGKFNLGKLYEKIGFNKETISRGRYAELFAAEQRPFRPDEAELFAKSAQNAYKQFRDKAALSRSMTVDKMEEVAQGRVWTGKDAASGGLVDAIGGLSRAIAIAKLKAKIPQDRKVTLVEISRPSPSLPEILFGVGNTFAGVDRTLKELLQGLTFSDGVQARMDGIMFQTLEGYPYANPILLIIKDYLSSL 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0834 660 SUPERFAMILY ClpP/crotonase 353 565 IPR029045 -
Lal21g0834 660 Gene3D - 109 345 - -
Lal21g0834 660 MobiDBLite consensus disorder prediction 48 77 - -
Lal21g0834 660 PIRSF Protease_4_SppA 19 660 IPR004634 GO:0006465|GO:0008233|GO:0016021
Lal21g0834 660 Gene3D - 502 630 - -
Lal21g0834 660 Gene3D - 355 501 - -
Lal21g0834 660 TIGRFAM SppA_dom: signal peptide peptidase SppA, 36K type 360 574 IPR004635 GO:0006508|GO:0008233
Lal21g0834 660 Pfam Peptidase family S49 177 329 IPR002142 GO:0006508|GO:0008233
Lal21g0834 660 Pfam Peptidase family S49 428 578 IPR002142 GO:0006508|GO:0008233
Lal21g0834 660 PANTHER PROTEASE 4 15 659 - -
Lal21g0834 660 SUPERFAMILY ClpP/crotonase 97 315 IPR029045 -
Lal21g0834 660 CDD S49_SppA_67K_type 112 325 - -
Lal21g0834 660 CDD S49_Sppa_N_C 360 574 IPR002142 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0834 Lal-Chr21 7547159 7569063 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0834 K04773 - gmx:100781522 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0834 21 7547159 7569063 Lal21g0834 21 7547159 7569063 ECH