Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0822 ATGGAGATTCGGAGCTCCACTTCCATCGAAGCAAAACCCTCAAAGAATGTTGTTTCTAATGGCAATTTCTTTGTATGGAGAGAGTTTGTGTGGGGAGCTGTTGCTGGAGCTTTCGGGGAAGGAATGATGCATCCAGTGGACACCATTAAAACACGAATGCAATCTCAAGCTATTCTTGATGGAATTCTGAACCAGAAGAGCATATTGCAGATGGTACAATCTGTGTGGCGGGCTGATGGATTAAGAGGATTTTACAGGGGTGTAATACCTGGTATTACTGGCTCTCTTGCTACTGGTGCTACATATTTTGGTGTCATAGAGTCCACCAAAAAGTGGATTGAGGATTCACATCCTAGCCTTCGTGGCCACTGGGCACATTTCATTGCAGGAGCTGTTGGAGATACCCTTGGTTCTTTTGTGTATGTTCCATGTGAAGTTATGAAGCAACGCATGCAGGTTCAGGGAACAATTATGTCTTGGAGTTCTGATACCATGATTAATGGTGCTGCAGTAAAGCCTGGTGCGCAAATATATGGTTATTACACAGGGATGTTCAATGCCGGCTGCACAATATGGAAAACACAGGGTTTAAGGGGTTTATATGCAGGATATTTGTCTACCCTAGCAAGGGATGTACCATTTGCTGGCTTAATGGTCATGTTTTATGAATCTTTGAAAGAAGTTACAGAATACGGAAAGCAAAGATTGATATCCACCCCAACATGGCATGTGAATAATTCATTTGAGGGGCTTATTCTAGGAGGATTAGCTGGTGGGCTTAGCGCATATCTCACGACTCCCTTGGATGTTGTCAAAACAAGATTGCAAGTGCAGGGTACAATTTTGAGGTACAATGGCTGGTTGGATGCAATTTGCAAAATCTGGGCTAAGGAAGGTATGAAGGGGATGTTTAGGGGTAGCATCCCTAGGATTACATGGTACATTCCGGCTTCGGCGCTTACATTCATGTGCCAGATAATAATTTGCAAGTTGCAAGATTATCAGGAGACCATAAGAAATCTTCTCTGCAATAGTTTTAATAAGTGCCTCAACAAGAGCATTGACTGA 1068 0.4298 MEIRSSTSIEAKPSKNVVSNGNFFVWREFVWGAVAGAFGEGMMHPVDTIKTRMQSQAILDGILNQKSILQMVQSVWRADGLRGFYRGVIPGITGSLATGATYFGVIESTKKWIEDSHPSLRGHWAHFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTIMSWSSDTMINGAAVKPGAQIYGYYTGMFNAGCTIWKTQGLRGLYAGYLSTLARDVPFAGLMVMFYESLKEVTEYGKQRLISTPTWHVNNSFEGLILGGLAGGLSAYLTTPLDVVKTRLQVQGTILRYNGWLDAICKIWAKEGMKGMFRGSIPRITWYIPASALTFMCQIIICKLQDYQETIRNLLCNSFNKCLNKSID 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0822 355 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 3 324 - -
Lal21g0822 355 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 228 IPR018108 -
Lal21g0822 355 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 3 324 - -
Lal21g0822 355 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 112 IPR018108 -
Lal21g0822 355 ProSiteProfiles Solute carrier (Solcar) repeat profile. 245 331 IPR018108 -
Lal21g0822 355 SUPERFAMILY Mitochondrial carrier 24 324 IPR023395 -
Lal21g0822 355 Gene3D Mitochondrial carrier domain 169 348 IPR023395 -
Lal21g0822 355 Pfam Mitochondrial carrier protein 123 228 IPR018108 -
Lal21g0822 355 Pfam Mitochondrial carrier protein 247 324 IPR018108 -
Lal21g0822 355 Pfam Mitochondrial carrier protein 24 115 IPR018108 -
Lal21g0822 355 Gene3D Mitochondrial carrier domain 8 168 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0822 Lal-Chr21 7332514 7341590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0822 25 322 EF-hand Containing Proteins AT2G35800 29.431 4.72e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0822 - - gmx:100790921 537.339