Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0787 ATGAGGCAAGACAACTTCTCTGTTCAGAAGAGAACCACCTCCGCAACCTTACCCACCACCGCAACCACCAGATCTCGCACCGGCGCCTTACCACGTGGCCGTCAGATCCAAAAGACCTTCAACAACATCAAAATCACCATCCTCTGCGGCTTCGTCACCATCCTCGTCCTCCGCGGCACAATCGGCGTCAACCTCGGATCCTCCGACGCCGACGCCGTTAACCAGAACCTCGTCGAAGAAACCAACCGCATCCTCGCCGAGATCCGATCTGACGCCGATCCCAACGACCCCGACGATGAAACATTCTTGAACCCTAATGTCACCTTCACGCTGGGTCCCAAGATCAGAAATTGGGACCAAGAGCGAAAAACATGGTTCGGTCAGAACCCAGAGTACCCTAATTACATAAAAGGTAAACCTCGAATATTGCTGCTAACTGGGTCACCGCCAAAACCATGTGATAACCCAATTGGGGATCATTATTTGTTGAAATCCATTAAGAACAAGATTGATTACTGTAGATTGCATAACATTGAGATTGTGTACAATTTAGCACATTTGGATAAGGAACTTGCTGGGTATTGGGCCAAATTACCTATGATTAGGAGGTTGATGCTGTCACACCCTGAGATTGAGTGGATTTGGTGGATGGATAGTGATGCATTTTTCACTGATATGGTTTTTGAGCTTCCTATGTCGAAATATGATGACTATAATTTGATCCTTCATGGGTACCCTGATTTGTTGTTTGAGCAGAAGTCTTGGATCTCAGTCAATACAGGAAGCTTTTTGTTCCGGAATTGCCAGTGGTCATTGGATTTGCTTGATGTCTGGGCCCCGATGGGTCCTAAGGGTCCGATTCGAGAAGAGGCTGGGAAGATCTTGACTGCTAATCTCAAGGGCAGGCCGGCGTTTGAGGCAGATGATCAGTCGGCCTTGATATACTTGTTGCTATCTCAAAAGGAACATTGGATGGATAAGGTGTTTTTGGAGAATTCATTTTATTTGCATGGTTACTGGGTCGGGTTGGTAGACCGTTATGAGGAGATGATCGAGAAATATCATCCGGGGTTAGGTGATGAGCGGTGGCCATTCGTGACACATTTTGTGGGTTGTAAGCCTTGTGGGAGCTACGGAGATTATCCGGTGGAGAGGTGCCTAAGTAGCATGGAAAGAGCTTTCAATTTTGCAGATAATCAGGTGCTCAAGCTCTATGGCTTTAGGCACCGTGGTCTGTTGAGCCCTAAAATCAAGAGGATCCGAAATGAGACGGTTACTCCTTTGGAGTTTGTAAACCAGTTTGATATAAGAAGACATCCTTCAGGGAGCACTGAATCGAAAAGCTAG 1347 0.4684 MRQDNFSVQKRTTSATLPTTATTRSRTGALPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGSSDADAVNQNLVEETNRILAEIRSDADPNDPDDETFLNPNVTFTLGPKIRNWDQERKTWFGQNPEYPNYIKGKPRILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHNIEIVYNLAHLDKELAGYWAKLPMIRRLMLSHPEIEWIWWMDSDAFFTDMVFELPMSKYDDYNLILHGYPDLLFEQKSWISVNTGSFLFRNCQWSLDLLDVWAPMGPKGPIREEAGKILTANLKGRPAFEADDQSALIYLLLSQKEHWMDKVFLENSFYLHGYWVGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVNQFDIRRHPSGSTESKS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0787 448 MobiDBLite consensus disorder prediction 1 30 - -
Lal21g0787 448 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 138 285 IPR029044 -
Lal21g0787 448 Pfam galactosyl transferase GMA12/MNN10 family 139 377 IPR008630 GO:0016021|GO:0016757
Lal21g0787 448 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 11 441 IPR008630 GO:0016021|GO:0016757
Lal21g0787 448 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 11 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0787 Lal-Chr21 6793420 6794766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0787 2 448 Glycosyltransferase AT5G07720 76.923 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0787 K08238 - gmx:100819400 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0787 21 6793420 6794766 Lal21g0787 21 6793420 6794766 ECH