Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0765 ATGGAAGGAGAAGAAGGATCTCAGCATCCACATCTAATTCTCGCTAGCAAGCTATTCCTTCTCACCCTCTCCGATGTTCCTGACATTGAAAAGCTTCGATTCAAAGACGAAGTTTTCACCTTTGTCAAAAAAGACGATATGCTTCCTTTGTACGAAACCCTAATTGCTACTTCTGTGTTGGACGCGGATCCTGCACTTCTGGACTCGATGCGTGCTAAATTGGATGACCAACTCAAGAAGCTGGATGAAAAGATTGCTGATGCTGAGGAAAATTTAGGGGAGAGTGAAGTTCGAGAGGCTCACTTGGCGAAATCCTTGTTTTTTATCCGGATTGGTGACAAGGTACATTCCTGTTATAACTTATGTCCCTCTCTCTTCCTGTCAGCTGCAATCTTATTTGGTGTTACAACATTGTCCCGTATGAACCAGGAGAAAGCCTTGGAACATATCAAGGTGACAGAAAGCAAGACGGTTGCAATTGGCCAGAAGATGGACCTAGTATTTTATACATTACTCCTTGGTTTCTTTGACATGGATTTTGATCTCATTGCCAAAAGCATTGAGAAAGCTAAAAGCTTATTTGAAGAAGGTGGTGATTGGGAGAGAAAGAATAGGCTGAAAGTGTATGAGGGATTGTACTGCATGTCAACTCGAAATTTCAAGAAGGCTGCTGATCTGTTCTTGGATTCTATTTCTACCTTTACGACCTATGAGCTTTTCCCCTATGACACCTTTATATTTTACACCGTTTTGACAAGCATTATATCTTTGGATAGAGTTTCTTTGAAGCAAAAGGTTGTGGATGCTCCTGAGATCTTGACAGTGATTGGCAAAATCCCACATCTTTCTGAGTTTTTAAACTCTTTATATGACTGTCAATACAAGTCTTTCTTCACAGCATTTGCTGGCTTGACGGAACAAATTAAGTTGGATCGCTATTTGCATCCACATTTCCGGTATTACATGAGGGAAATCCGAACTGTTGTTTATTCCCAGTTTTTGGAATCATATAAGAGTGTTACAATTGAGGCTATGGCAAAAGCCTTTGGAGTGACAGTAGATTTCATTGATGTGGAGCTATCACGTTTTATTGCAGCTGGGAAACTTCATTGCAAGATTGACAAAGTTGCCGGCGTTCTGGAAACTAACCGCCCCGATGCTAAGAATGCTCTTTACCAAGCAACTATTAAGCAAGGCGACTTCCTACTGAACCGGATTCAGAAATTATCACGTGTGATTGACCTTTGA 1248 0.4103 MEGEEGSQHPHLILASKLFLLTLSDVPDIEKLRFKDEVFTFVKKDDMLPLYETLIATSVLDADPALLDSMRAKLDDQLKKLDEKIADAEENLGESEVREAHLAKSLFFIRIGDKVHSCYNLCPSLFLSAAILFGVTTLSRMNQEKALEHIKVTESKTVAIGQKMDLVFYTLLLGFFDMDFDLIAKSIEKAKSLFEEGGDWERKNRLKVYEGLYCMSTRNFKKAADLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVIGKIPHLSEFLNSLYDCQYKSFFTAFAGLTEQIKLDRYLHPHFRYYMREIRTVVYSQFLESYKSVTIEAMAKAFGVTVDFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVIDL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0765 415 Coils Coil 67 98 - -
Lal21g0765 415 Pfam PCI domain 281 383 IPR000717 -
Lal21g0765 415 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 316 399 - -
Lal21g0765 415 Gene3D - 18 366 - -
Lal21g0765 415 Pfam 26S proteasome subunit RPN7 142 265 IPR045135 -
Lal21g0765 415 Pfam 26S proteasome subunit RPN7 63 115 IPR045135 -
Lal21g0765 415 ProSiteProfiles PCI domain profile. 219 387 IPR000717 -
Lal21g0765 415 SUPERFAMILY "Winged helix" DNA-binding domain 311 392 IPR036390 -
Lal21g0765 415 PANTHER 26S PROTESOME SUBUNIT 6 2 117 IPR019585 -
Lal21g0765 415 PANTHER 26S PROTESOME SUBUNIT 6 142 415 IPR019585 -
Lal21g0765 415 PANTHER OS02G0600100 PROTEIN 142 415 - -
Lal21g0765 415 PANTHER OS02G0600100 PROTEIN 2 117 - -
Lal21g0765 415 SMART PINT_4 316 399 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0765 Lal-Chr21 6375840 6380987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0765 K03037 - gmx:100810692 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0765 21 6375840 6380987 Lal21g0765 21 6375840 6380987 ECH