Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0758 ATGGCAACAATTACAGCAGACAACAATGGCCTCGATCACAACCCATCTCTGGACCCAGATACAGATACTCCGGACAACCCCGAACATGAGTTCGGGGAGTTCGGAGCTGGTTGTTTCTGGGGCGTGGAGCTTGCATTTCAGCGAGTAACGGGTGTGGTGAAGACTGAGGTTGGATATTCTCAAGGTCACACACCAGATCCCAATTACAAACTGGTGTGCACTGGAACCACTAACCATGTTGAAGTGGTTCGGGTTCAGTTTGACCCTAAAGTGAGCCCATATACTACTCTCCTTGATCTCTTTTGGTCTCGCCATAACCCCACTACTCTCAATCGCCAGGGTGAAGATGTGGGTGCACAATATAGATCAGGAATATACTACTACAATGAAACTCAGGCTCGTTTAGCCAAAGAGTCAAAAGAAGCCAAACAATTGGAGTTAAAGGAAAACATTGTAACAGAAATTCTTCCTGCAAAGAAATTCTATAGAGCAGAGGAATACCATCAGCAATATTTGGAGAAGGGTGGAGGTAAGGGTCTCAAGCAGTGTTCAGCAAAGGGTTGCAATGACCCTATCAGGTGCTATGGTTGA 591 0.4602 MATITADNNGLDHNPSLDPDTDTPDNPEHEFGEFGAGCFWGVELAFQRVTGVVKTEVGYSQGHTPDPNYKLVCTGTTNHVEVVRVQFDPKVSPYTTLLDLFWSRHNPTTLNRQGEDVGAQYRSGIYYYNETQARLAKESKEAKQLELKENIVTEILPAKKFYRAEEYHQQYLEKGGGKGLKQCSAKGCNDPIRCYG 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0758 196 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE FAMILY PROTEIN 12 196 - -
Lal21g0758 196 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 33 174 IPR002569 GO:0008113
Lal21g0758 196 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 12 196 - -
Lal21g0758 196 Coils Coil 128 148 - -
Lal21g0758 196 SUPERFAMILY Peptide methionine sulfoxide reductase 27 177 IPR036509 GO:0008113
Lal21g0758 196 MobiDBLite consensus disorder prediction 1 16 - -
Lal21g0758 196 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 29 186 IPR002569 GO:0008113
Lal21g0758 196 Gene3D Peptide methionine sulphoxide reductase MsrA 18 196 IPR036509 GO:0008113
Lal21g0758 196 MobiDBLite consensus disorder prediction 1 29 - -
Lal21g0758 196 Pfam Peptide methionine sulfoxide reductase 34 175 IPR002569 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0758 Lal-Chr21 6276308 6278466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0758 K07304 - qsu:112013880 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0758 21 6276308 6278466 Lal21g0758 21 6276308 6278466 ECH