Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0710 ATGGTTTCTGATTTAACCTCCCCTTCTCCCATTCCTTCAGCCACCATCACCAAGAATATGGGCAAAAAGAAAAGGACCAATAGGTCCGCAAAATTGAAGCAGTGTAAGATTGATGCACGTCGTCAACAATGGCTATCCCAAGTTTCTGCTAAGAACAAGGGTTGCAGTGATGATGATGCTTGCACACTGATGAAAGGAAGCAAGGTTTCGTTGGAGAAACTAGAAATGGGGAGTATAGATGAAGAAGAGGATGAGGGATTGATCGGCCATGGAAGCTATTCCGAGTCAGTGTCAAACAGTCCCACCAGTGTTAACAATTGCATTCATTATGGGACAAATTTCATTGGTTGTTGCAGCAATGGAAGCAGTAGCAGTAGTAGTACTAGCAGTGCTGGCTGCCGCTCTGGGAATGTCACAGAAGATGAAGGTGATGATGGATGCTTGGATGATTGGGAGGTCATGGCTGATGCTTTAGCCGCCAATGACAAGAACCAAAACCCTTGTTCGGAGTTGCCCCCTGAGGCTGAACCTGTGGTCCAAATGGTATTGCCTGGTGAACTGATTAATGGGCTGAATGCAGCGCCTCATAATTGTAAACCAGATAGTGCTAGATTAGATCCTTGTTCCTCTCGTAACGGTCGAGCTTGGAGAACTGATGATGCTTTTCGCCCTCAATGTTTGCCTAACCTTTCTAAGCAGCATAGTTTGCCAAACCCTGATAGGCGTTGTGGAGGAGGGGTCCCCTGGGCTTTCATTGCTGCACCATCGACCTGTCCAATTTGCTGCGAGGATCTTGATTTGACGGACTCCAGCTTTTTGCCATGTCTGTGTGGATTCTCGATCTGCCTCTTTTGTCACAAGAGGATTCTCGAGGAGGATGGCCGTTGTCCTGGGTGCAGGAAGCCGTATGAGTGTGAACCTATTGAGACAGAGGCAAGTGTGCATGAAGGCAGCCTAACTCTTCGGTTGGCCTATTCACGTAGCATGTTTGAAAGATCTTGA 1002 0.4741 MVSDLTSPSPIPSATITKNMGKKKRTNRSAKLKQCKIDARRQQWLSQVSAKNKGCSDDDACTLMKGSKVSLEKLEMGSIDEEEDEGLIGHGSYSESVSNSPTSVNNCIHYGTNFIGCCSNGSSSSSSTSSAGCRSGNVTEDEGDDGCLDDWEVMADALAANDKNQNPCSELPPEAEPVVQMVLPGELINGLNAAPHNCKPDSARLDPCSSRNGRAWRTDDAFRPQCLPNLSKQHSLPNPDRRCGGGVPWAFIAAPSTCPICCEDLDLTDSSFLPCLCGFSICLFCHKRILEEDGRCPGCRKPYECEPIETEASVHEGSLTLRLAYSRSMFERS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0710 333 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 16 331 - -
Lal21g0710 333 CDD mRING-HC-C4C4_CNOT4 258 301 IPR039515 -
Lal21g0710 333 MobiDBLite consensus disorder prediction 1 20 - -
Lal21g0710 333 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 253 318 IPR013083 -
Lal21g0710 333 ProSiteProfiles Zinc finger RING-type profile. 258 300 IPR001841 -
Lal21g0710 333 SUPERFAMILY RING/U-box 253 310 - -
Lal21g0710 333 MobiDBLite consensus disorder prediction 1 32 - -
Lal21g0710 333 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 16 331 IPR039780 GO:0004842|GO:0030014
Lal21g0710 333 Pfam RING/Ubox like zinc-binding domain 258 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0710 Lal-Chr21 5701366 5706164 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0710 - - var:108330419 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0710 21 5701366 5706164 Lal21g0710 21 5701366 5706164 ECH