Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0705 ATGCAACCACCACAAATTCTGACGCCACCGAATTCGAACGGTGGCGCTGCCGGAGTTGTTGATGCTCCTTCCCATGTTAGAATTTATCGTGTCTGGAAAGGCACTAATGAATTTTTGCTTCATGGGAGGCTTATATTTGGACCTGATGTAAAATACACATTGATCACAATATTTCTTATAGTTGCCCCTATTGCAATTTTCTGTGTTTTTGTGGCTAGGAAGTTGGTTGAACATCCTTATCGGTCAGGATATTCAATACCAATTATAGTCATTGTTCACACAGTTTTTGTTCTTATCACCCTTCTACTAACCGCAGCAAGAGATCCTGGCATAGTGCCTCGTAATGCTCATGCTCCAGAGCCAGATGAGTATGATGAGTGTGGCAATTTCTACAGTGAACAAAGTCCACAGAGACGTTTGCCTCGAACAAAGGATGTTATAGTGAATGGTATTTCTATCAAAATAAAATACTGTGATACCTGCAAGCTCTATAGGCCTCCTCGTTGTTTTCATTGTTCAGTATGTGATAACTGTGTGGAGCGATTTGATCATCACTGCCCATGGGTGGGTCAATGTATTGGATTGAAAGCTTACAAAATTGATAGTCTATTTTATGGAAAACATTTGCTAGTTCATAAGGTTGCATGTGAAACACAAAGAACAGAAATCGGTAGACATGATGATGAAGTTACTAACTTGGAATGTTCTTTTGCCTCTTTGCTTATATGTACATTGCTGCAGAGGAATTATAGGTTCTATTACATGTTTATCTTCTCTACAACTCTTCTTTGCTTAAATGTACATGGCTTTTGTTGGGCATATGTTAAGTGCATCATGGACTCTGAGGAGATATCAATTTGGAAAGCACTTATGAAAACTCCTGCTTCCATTGCTCTAATAATTTACACTTCCATTTCTGTCTGGTTTGTTGGGGGCCTCACTGTTTTTCATACCTATCTCATCAGCGAAAACCAGTCTACTTATGAAAATTATAAGAATCACTATGACAGACAGGTCAACCCATACAATAAAGGGATAGTTTACAACTTCAAAGAAATATTCTGCTCTATCATTCCTCCATCCAAGAACAATTTCAGGTCTAAGGTTACAATCCCAAAAGACCCATCAGATTCATCTGAAAGAAAGGGTGTTGAATCCCTGATATCTTTGATGAAAAAAACAAGAGGTGACTTGGAATTCGGGAAACCAGATTATGATGAAGTTTATGAGGTGCAAAATGATTCTATAGATGGATTTATCAATGAAGATGAAGTTGGCAATTGTAGTGAATTTTCTGATATTTCAGTGGATTTGATCAAGATGCTTCACACAGAAGGGGGAGAGAGACTAGTTGCTTCATTCCTTAGGGATAATTTATGGGAAAGAAGCAGTAGAAGGCTAGACTTAGGTAATAAAATTGTGGACAGTATACATCAAGTTGGAGAATCAAAGCGGAACACTACTCATAGTGCTATTGATAGTGCAACTCATAGTGCTATTGATAGTGCAACTCATAGTGCAACTACTAGTGCAACTGATATTGCAATTCATAGTGCAACTGATATTGCAACTGATACTGCAACTGATAGTGCTAGTGGGTCTGTTGGCTCCATAATACGTGACAAGTTTAAAGATGTAAGTTAA 1644 0.3814 MQPPQILTPPNSNGGAAGVVDAPSHVRIYRVWKGTNEFLLHGRLIFGPDVKYTLITIFLIVAPIAIFCVFVARKLVEHPYRSGYSIPIIVIVHTVFVLITLLLTAARDPGIVPRNAHAPEPDEYDECGNFYSEQSPQRRLPRTKDVIVNGISIKIKYCDTCKLYRPPRCFHCSVCDNCVERFDHHCPWVGQCIGLKAYKIDSLFYGKHLLVHKVACETQRTEIGRHDDEVTNLECSFASLLICTLLQRNYRFYYMFIFSTTLLCLNVHGFCWAYVKCIMDSEEISIWKALMKTPASIALIIYTSISVWFVGGLTVFHTYLISENQSTYENYKNHYDRQVNPYNKGIVYNFKEIFCSIIPPSKNNFRSKVTIPKDPSDSSERKGVESLISLMKKTRGDLEFGKPDYDEVYEVQNDSIDGFINEDEVGNCSEFSDISVDLIKMLHTEGGERLVASFLRDNLWERSSRRLDLGNKIVDSIHQVGESKRNTTHSAIDSATHSAIDSATHSATTSATDIAIHSATDIATDTATDSASGSVGSIIRDKFKDVS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0705 547 Pfam DHHC palmitoyltransferase 154 204 IPR001594 GO:0016409
Lal21g0705 547 Pfam DHHC palmitoyltransferase 247 333 IPR001594 GO:0016409
Lal21g0705 547 PANTHER S-ACYLTRANSFERASE 21 202 - -
Lal21g0705 547 PANTHER S-ACYLTRANSFERASE 248 491 - -
Lal21g0705 547 ProSiteProfiles DHHC domain profile. 156 204 - -
Lal21g0705 547 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 21 202 - -
Lal21g0705 547 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 248 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0705 Lal-Chr21 5638509 5642637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0705 86 199 Lipid Metabolism Gene Families AT4G22750 33.898 1.90e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0705 - - gmx:100791866 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0705 21 5638509 5642637 Lal21g0705 21 5638509 5642637 ECH