Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0647 ATGTCTTCTGAAACCAAGGGTGATAGGAAGGCTACCCTTGATGCAGCATCATGGTTTTTCAATGTAGTGACATCTGTAGGGATAATCCTTGTGAATAAAGCCCTGATGGCTACATATGGTTTCAGTTTTGTTGGATACTTGAGAGAGGAATTTAATGGGAAGATAGAAATGTGGAGAGAAGATTTAGAAGCACGTGACTTTTGTAGAAATCGAACTACAACTTTAACCGGAATGCATTTTGCCACAACGACCTTGTTAACTACTATTCTTAAGTCGCTGGGATATATCCAGAGCTCCCATATTCCGTTGGCTGATATAATCAAATTTGTCTTATTTGCAAATTTCTCCATTGTTGGAATGAATGTCAGTTTAATGTGGAACTCTGTTGGTTTCTATCAGATTGCTAAGCTGAGTATGATTCCAGTATCTTGTTTCCTGGAAGTTGTCTTGGACAATGTGAGATATTCAAGGGACACAAAACTTAGCATTATTTTGGTTCTTCTTGGTGTTGCTGTCTGTACAGTCACCGATGTCAGTGTCAACACTAAGGGTTTCATAGCTGCTGCAATAGCAGTTTGGAGCACGGCACTGCAGCAGTATTATGTTCATTTTCTTCAGAGGAAGTATTCTGTTGGATCGTTTAACTTGTTGGGCCACACTGCACCAGCACAGGCAGCAAGTTTACTGCTAGTAGGCCCATTTATGGACTATTGGTTGACAAACAAACGAGTTGATGCCTACAACTATGGTTTGACATCTATTTTGTTCATCATTCTGTCATGCTCCATCGCAGTAGGGACAAACCTTAGCCAGTTCATCTGCATTGGTAGGTTTACGGCTGTAACGTTCCAAGTCCTAGGCCATATGAAGACTATTCTGGTCCTAATCTTAGGATTTATTTTCTTTGGTAAAGAGGGTCTCAATCTTCAAGTAGTTCTAGGCATGCTCATTGCAATAATGGGAATGGTTTGGTATGGCAATGCATCTTCTAAGCCAGGAGGGAAAGAACGTCGTAGCTTTTCGATTCCTACCACCAAAACACCAGATTATAGTGCTGTACCTGTGTCCACTGAACCAGATGAGAAGGTATAG 1092 0.4103 MSSETKGDRKATLDAASWFFNVVTSVGIILVNKALMATYGFSFVGYLREEFNGKIEMWREDLEARDFCRNRTTTLTGMHFATTTLLTTILKSLGYIQSSHIPLADIIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDNVRYSRDTKLSIILVLLGVAVCTVTDVSVNTKGFIAAAIAVWSTALQQYYVHFLQRKYSVGSFNLLGHTAPAQAASLLLVGPFMDYWLTNKRVDAYNYGLTSILFIILSCSIAVGTNLSQFICIGRFTAVTFQVLGHMKTILVLILGFIFFGKEGLNLQVVLGMLIAIMGMVWYGNASSKPGGKERRSFSIPTTKTPDYSAVPVSTEPDEKV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0647 363 PANTHER SOLUTE CARRIER FAMILY 35 7 45 - -
Lal21g0647 363 PANTHER SOLUTE CARRIER FAMILY 35 70 342 - -
Lal21g0647 363 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 70 342 - -
Lal21g0647 363 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 7 45 - -
Lal21g0647 363 Pfam Triose-phosphate Transporter family 73 325 IPR004853 -
Lal21g0647 363 MobiDBLite consensus disorder prediction 329 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0647 Lal-Chr21 4923777 4930552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0647 121 349 Organic Solute Cotransporters AT1G53660 23.932 9.15e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0647 - - gmx:100800306 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0699 17 4935862 4940667 Lal21g0647 21 4923777 4930552 LSH
Lal21g0647 21 4923777 4930552 Lal4g0341 4 2287502 2291144 LSH