Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0630 ATGGAGAAGAACCAGAAACAGAGCAACTATGTTTTTATTCACTTGGTGATAGTTCTGTTACTATGTTCCTCCTCTGTTTCGGTTTCAGAGAAGATTGTTCCTCTCTTGCAGAGTTATGAGAAACCCATATTTAGATCGAACTTTCAAACCATTTATGACACTTCAAAGTATGGTGTATTTCATCTTAGTAATGGGTTGGCTCAAACTCCTCAAATGGGATGGAATAGCTGGAACTTCTTTGCCTGCAATATCAATGAAACTGTTATTAAGGAAACAGCCGATGCGCTGATATCGACTGGGTTGGCTGATATAGGCTATGAGTATGTCAACATAGATGATTGCTGGTCTAAGGCAACAAGAGATTCAAAGGGTCAACTGGTCCCTGATCCTAAGACATTCCCATCAGGAATCAAAGCTCTTGCAGATTATATACATGGGAAGGGACTCAAGATCGGTATATATTCTGATGCTGGGGCTTTTACATGTCAAGTTAGACCAGGATCACTTTTCCATGAAAACGATGATGCAGATTTATTTGCCTCTTGGGGTATAGATTATTTGAAGTATGACAATTGTTTCAATCTGGGTATCCCACCAAAAAAAAGATACCCACCGATGCGTGATGCTCTCAATGCAACTGGACATAAGATTTTCTATTCACTATGTGAATGGGGTGTTGATGACCCTGCCTTATGGGCCGGCACGGTTGGTAATAGTTGGCGCACAACCGATGACATCAATGATTCATGGGAAAGCATGACAACTATTGCCGACCTTAATGACAAATGGGCTGCATATGCTGGTCCTGGAGGATGGAACGACCCAGATATGTTGGAAGTCGGCAATGGTGGTATGACTTACGAGGAATATCGTGCTCACTTCAGCATATGGGCTTTGATGAAGGCTCCATTATTGATTGGTTGCGATGTAAGAAATTTAACTGCTGAAACACTTGAGATTTTGAGCAATAAGGAAGTCATTGCCGTAAATCAAGACCCACTTGGAGTCCAGGGAAGGAAGGTTTATGCTACTGGAAAAGATGGTTGCAGCGAGGTTTGGGCAGGTCCTTTATCAGGACATAGATTGGCTATTGCTCTCTGGAACAGGTGCTTAAAAGTTGCTACTATAACAGCTTCATGGACAGAAATTGGGCTTGAATCTGGACTTCAGGTTTCTGTAAGGGATTTGTGGCAGCACAAGGTAGTAAATACAGATGCAGTGTCCTCATTCAGTGCTAGAGTTAATGCTCATGATTCTCATCTCTATATTTTCACTCCAACTACAGCATCTTACTCTGTACAATAG 1305 0.4184 MEKNQKQSNYVFIHLVIVLLLCSSSVSVSEKIVPLLQSYEKPIFRSNFQTIYDTSKYGVFHLSNGLAQTPQMGWNSWNFFACNINETVIKETADALISTGLADIGYEYVNIDDCWSKATRDSKGQLVPDPKTFPSGIKALADYIHGKGLKIGIYSDAGAFTCQVRPGSLFHENDDADLFASWGIDYLKYDNCFNLGIPPKKRYPPMRDALNATGHKIFYSLCEWGVDDPALWAGTVGNSWRTTDDINDSWESMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYEEYRAHFSIWALMKAPLLIGCDVRNLTAETLEILSNKEVIAVNQDPLGVQGRKVYATGKDGCSEVWAGPLSGHRLAIALWNRCLKVATITASWTEIGLESGLQVSVRDLWQHKVVNTDAVSSFSARVNAHDSHLYIFTPTTASYSVQ 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0630 434 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 49 427 IPR002241 GO:0004553|GO:0005975
Lal21g0630 434 Pfam Alpha galactosidase C-terminal beta sandwich domain 348 423 IPR041233 -
Lal21g0630 434 Gene3D - 335 427 IPR013780 -
Lal21g0630 434 CDD GH27 70 332 IPR002241 GO:0004553|GO:0005975
Lal21g0630 434 Gene3D Aldolase class I 62 334 IPR013785 -
Lal21g0630 434 PRINTS Glycosyl hydrolase family 27 signature 64 83 IPR002241 GO:0004553|GO:0005975
Lal21g0630 434 PRINTS Glycosyl hydrolase family 27 signature 100 115 IPR002241 GO:0004553|GO:0005975
Lal21g0630 434 PRINTS Glycosyl hydrolase family 27 signature 141 162 IPR002241 GO:0004553|GO:0005975
Lal21g0630 434 PRINTS Glycosyl hydrolase family 27 signature 175 192 IPR002241 GO:0004553|GO:0005975
Lal21g0630 434 PRINTS Glycosyl hydrolase family 27 signature 202 220 IPR002241 GO:0004553|GO:0005975
Lal21g0630 434 PRINTS Glycosyl hydrolase family 27 signature 267 286 IPR002241 GO:0004553|GO:0005975
Lal21g0630 434 PRINTS Glycosyl hydrolase family 27 signature 288 309 IPR002241 GO:0004553|GO:0005975
Lal21g0630 434 PANTHER ALPHA-GALACTOSIDASE 49 427 - -
Lal21g0630 434 Pfam Alpha galactosidase A 69 332 IPR002241 GO:0004553|GO:0005975
Lal21g0630 434 ProSitePatterns Alpha-galactosidase signature. 105 121 IPR000111 GO:0004553|GO:0005975
Lal21g0630 434 SUPERFAMILY (Trans)glycosidases 61 333 IPR017853 -
Lal21g0630 434 SUPERFAMILY Glycosyl hydrolase domain 334 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0630 Lal-Chr21 4754081 4761253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0630 15 432 Glycoside Hydrolase AT3G56310 70.991 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0630 K07407 - gmx:100784072 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0630 21 4754081 4761253 Lal21g0630 21 4754081 4761253 ECH