Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0607 ATGGAGAAAGGGAAGAAGCAACAAGGAGGAGCTACGGTGGTTGTACCAAATTTCTTACCTCACCAACTTCACAACCCAATACAAGAAATTCAAATACGTTTCAAGCAGTTAGAATCCGGTTTCAAACTTTGGCTCTCTAAACAATCTCTCCCCGTCGAGGCCGCCGTCGTCACCGCCACTAGCGCCGCCCAAGGTGCCGCCATCGGTGCTTTTATGAGTACCTTCACATCTGAAGCTTCTTCCATTTTCCCTACTCCGCCTCCTAATGCTTCTCTTAGCCCTCAAGCCATGGCCTCTCTTAAACAAGCTCAGGCTCTTTCTGGCGGTCCGTTTGTTCAAGGACGCAACTTTGCTGTTATGACCGGAGTGAATGCTGGTATTACCTGTGTCTTGAGAAGGTTAAGGGGAAAGGAAGATGTCCAGAGCAGCATGGCAGCAGCTTTTGGTTCTGGGGCCATGTTTTCATTGGTAAGTGGCATGGGTGGACCAAATCAAGCAGCAAATGCGGTCACCTCAGGACTTTTCTTTGCACTTGTTCAAGGTGGTATTTTCCAGATAGGACAGAAGTTTTCTCAACCGCCTGCTGTAGATACTCACTATATTAAAACAAGCAGCATGTTGCACAACTTAGGCCTTCAGGGTTATGAGAAGAATTTTAAGAAAGGCTTCTTAACGGACAACACACTGCCTCTACTGACAGATAGTGCTCTGAGAGATGTAAAGATCCCTCCTGGACCCAGGCTTTTGATTCTCGATCACATTGAGAGGGACCCAGAGTTTAAGAGAGAAAAGCAAGGAGGTCGGAAATGA 810 0.4716 MEKGKKQQGGATVVVPNFLPHQLHNPIQEIQIRFKQLESGFKLWLSKQSLPVEAAVVTATSAAQGAAIGAFMSTFTSEASSIFPTPPPNASLSPQAMASLKQAQALSGGPFVQGRNFAVMTGVNAGITCVLRRLRGKEDVQSSMAAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGIFQIGQKFSQPPAVDTHYIKTSSMLHNLGLQGYEKNFKKGFLTDNTLPLLTDSALRDVKIPPGPRLLILDHIERDPEFKREKQGGRK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0607 269 CDD SAM_superfamily 204 256 - -
Lal21g0607 269 PANTHER CHLOROPLASTIC IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT HP30-2 2 257 - -
Lal21g0607 269 Pfam SAM domain (Sterile alpha motif) 207 256 IPR001660 GO:0005515
Lal21g0607 269 Gene3D - 204 265 IPR013761 -
Lal21g0607 269 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 2 257 IPR039175 GO:0042721|GO:0045039
Lal21g0607 269 SUPERFAMILY SAM/Pointed domain 203 258 IPR013761 -
Lal21g0607 269 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0607 Lal-Chr21 4578430 4583954 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0607 - - lang:109343460 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0607 21 4578430 4583954 Lal21g0607 21 4578430 4583954 ECH
Lal21g0607 21 4578430 4583954 Lal4g0554 4 4026564 4031100 LSH