Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0605 ATGGGTTCCAATGGATATGAAGAATCGGGTACCCAATTACCTAAAAACACCAAAAGTTCCTCCCTTTTCAGGTACAATTCACCATTTGTTCAGGTAATTCTTATTGGGTTGGTTTGTTTTTGTTGCCCTGGTATATTCAATGCTCTCTCTGGGATGGGTGGTGGTGGCCAAGTTAATGCCACTGCTTCCAATAACTCCTTAACTGCCTTATACATTTTCTTTTCCATCTTTGGCATCCTTGGTGGTGGCATCTACAACATCCTAGGACCCCATCTCACCCTTTTCGCTGGTTGTTCCACCTATGTTCTCTATTCAGGTTCATTTCTTTATTACAACCATTACCAGCACCAAGCCTTTGCTATAATTTCTGGTGCCATTCTTGGCATAGGAGCTGGTCTAGTATGGGCTGCACAAGGTGCTATCATGACATCATACCCTCCAATGAATAGAAAGGGCACTTATATCTCAATTTTCTGGAGCATTTTCAACATGGGGGGTGTGATTGGTGGTTTAATTCCCTTCATTTTGAACTATCATAATGATGCAGCTACTGTTAATGATGGCACATATATAGGGTTCATGGTGTTTATGGCAGGAGGAGCAGTTTTATCATTGGCTATTTTACCAGCTAATAAGGTTATTCGTGATGATGGTACTAAGTGTACAAATATCATGTACTCAAATGTAACTACTGAGTTTTTTGAGATTCTTAAGTTGTTCTCTAATTGGAAAATGCTTCTAATGATTCCTGCTGCTTGGTCCAGCAATTTCTTTTATACTTATCAGTTCAATCATGTTAATAAGACACAGTTTACTTTGAGGACTAGAGGGTTGAACAATGTGTTCTATTGGGGTGCACAAATGTTGGGGTCTGTTGGGATTGGATATGTAATGGATTTCAGTTTTAAGAGCAGAAGAAAGAGAGGGATTGTGGGAGTTTGTGTTGTTTCTGTTCTTGGGTCTTCTATTTGGGGTGGTGCAATTGCTAATCAGATTCAGCGTAATATATATCAGACTTTGGATTTTAAGGACTCAGGTTCTCACTTTGCTGGTCCCTTTGTGTTGTATTTCACGTTTGGATTACTTGATGCCATGTTCCAGAGCATGGTCTATTGGGTTATTGGAGCACTGAATAATGATTCTGAGAATCTTAGCAGGTATGCTGGGTTCTATAAAGGCATACAAAGTGCAGGTTCAGCAGTTGCATGGCAAATTGATAACCACAGTGTGACCCCTTTGAACCAATTGATTGTGAATGTTGTGCTCACTACAATAAGCTACCCATTAATGTTGCTTCTTGTCTTGAGAGCTGTGAAAGATAATGACCCAGAACAGGAACCAGTTAACAATGGTTTTACCCAATGA 1365 0.3993 MGSNGYEESGTQLPKNTKSSSLFRYNSPFVQVILIGLVCFCCPGIFNALSGMGGGGQVNATASNNSLTALYIFFSIFGILGGGIYNILGPHLTLFAGCSTYVLYSGSFLYYNHYQHQAFAIISGAILGIGAGLVWAAQGAIMTSYPPMNRKGTYISIFWSIFNMGGVIGGLIPFILNYHNDAATVNDGTYIGFMVFMAGGAVLSLAILPANKVIRDDGTKCTNIMYSNVTTEFFEILKLFSNWKMLLMIPAAWSSNFFYTYQFNHVNKTQFTLRTRGLNNVFYWGAQMLGSVGIGYVMDFSFKSRRKRGIVGVCVVSVLGSSIWGGAIANQIQRNIYQTLDFKDSGSHFAGPFVLYFTFGLLDAMFQSMVYWVIGALNNDSENLSRYAGFYKGIQSAGSAVAWQIDNHSVTPLNQLIVNVVLTTISYPLMLLLVLRAVKDNDPEQEPVNNGFTQ 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0605 454 PANTHER UNC93-LIKE PROTEIN 1 1 449 - -
Lal21g0605 454 CDD MFS_unc93-like 30 439 - -
Lal21g0605 454 PANTHER ET TRANSLATION PRODUCT-RELATED 1 449 - -
Lal21g0605 454 Pfam Ion channel regulatory protein UNC-93 56 257 IPR010291 -
Lal21g0605 454 SUPERFAMILY MFS general substrate transporter 32 434 IPR036259 -
Lal21g0605 454 Gene3D MFS general substrate transporter like domains 21 436 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0605 Lal-Chr21 4558901 4561864 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0605 - - gmx:100809554 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0605 21 4558901 4561864 Lal21g0605 21 4558901 4561864 ECH
Lal17g0636 17 4507561 4507914 Lal21g0605 21 4558901 4561864 LSH
Lal21g0605 21 4558901 4561864 Lal4g0552 4 4011015 4013691 LSH
Lal18g1190 18 14765008 14776690 Lal21g0605 21 4558901 4561864 PCT
Lal22g0399 22 2592985 2611302 Lal21g0605 21 4558901 4561864 PCT