Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0599 ATGGATACCCCAACCCAACAACAAGACCGCCACCTCCGACCACCCACCTCCTCCGTCACCTACGACTCTCCATACCCTCTCTACGCCATGTCCTTCTCCTCCTCCCACCACCCTCACCAACGCCGCCTCGCCGTCGGAAGCTTCATCGAGGAATACACCAACCGCATCGATATCCTCTCTTTCAACCCTGACACCCTCTCTCTCCTCCCAATCCCTTCTCTCTCCTTCGATCACCCTTACCCTCCGACCAAGATCATGTTCCACCCTTCCAACCCTCCCGCCCCCTCCCCCGACCTCATCGCCACCTCCGGCGACTACCTCCGCCTCTGGGAAATCCGAGATAACTCCGTTGAAACCGTTTCTCTCTTTAACAATAGTAAATCTAGCGAATTCTGTGCCCCTTTAACGTCTTTCGATTGGAACGATATTGAACCGAAGCGAATCGGAACTTCAAGTATTGACACTACTTGTACTATCTGGGATATTGAGAAAGGCGTGGTTGAAACGCAGCTTATAGCGCATGATAAAGAGGTTTATGATATTGCTTGGGGTGAAGCGCGTGTTTTTGCTTCAGTTTCTGCTGATGGGTCTGTTAGGATTTTTGATCTGAGAGATAAGGAGCATTCAACTATTATCTACGAGAGTCCGCAGCCGGATACGCCTTTGTTGCGTCTGGCTTGGAATAAACAGGATTTGAGGTATATGGCAACTATTTTGATGGATAGTAATAAGGTTGTGATTCTGGATATTCGGTCGCCGACTATGCCAGTGGCAGAGTTAGAGAGGCATAGGGGTAGTGTCAGTGCTATTGCTTGGGCTCCTCATAGTTCTAGGCATATTTGTTCAGGTGGGGATGATTCGCAGGCGCTTATTTGGGAGTTGCCTACTGTGGCTGGTCCTAATGGGATTGATCCGATTTCGATGTATTCTGCCGAGGCTGAAATTAATCAGCTTCAGTGGCCTGCTGCTCACCCTGATTGGATTGCAATTGCTTTTGCTAATAAGTTGCAGCTTTTGAAGAGTCTAAATTCTTCCATCAAGGGTATGACTTTTACAATGGGTGGTCGAAGGATTAGGCACCCTGGTGGGTGA 1092 0.4908 MDTPTQQQDRHLRPPTSSVTYDSPYPLYAMSFSSSHHPHQRRLAVGSFIEEYTNRIDILSFNPDTLSLLPIPSLSFDHPYPPTKIMFHPSNPPAPSPDLIATSGDYLRLWEIRDNSVETVSLFNNSKSSEFCAPLTSFDWNDIEPKRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHRGSVSAIAWAPHSSRHICSGGDDSQALIWELPTVAGPNGIDPISMYSAEAEINQLQWPAAHPDWIAIAFANKLQLLKSLNSSIKGMTFTMGGRRIRHPGG 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0599 363 ProSiteProfiles Trp-Asp (WD) repeats profile. 171 211 IPR001680 GO:0005515
Lal21g0599 363 Pfam WD domain, G-beta repeat 257 292 IPR001680 GO:0005515
Lal21g0599 363 Pfam WD domain, G-beta repeat 171 202 IPR001680 GO:0005515
Lal21g0599 363 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 260 294 - -
Lal21g0599 363 MobiDBLite consensus disorder prediction 1 20 - -
Lal21g0599 363 PANTHER WD REPEAT CONTAINING PROTEIN 1 340 IPR045159 -
Lal21g0599 363 PANTHER PROTEIN TRANSPARENT TESTA GLABRA 1 1 340 IPR031104 -
Lal21g0599 363 ProSiteProfiles Trp-Asp (WD) repeats profile. 260 294 IPR001680 GO:0005515
Lal21g0599 363 SMART WD40_4 116 161 IPR001680 GO:0005515
Lal21g0599 363 SMART WD40_4 164 202 IPR001680 GO:0005515
Lal21g0599 363 SMART WD40_4 67 111 IPR001680 GO:0005515
Lal21g0599 363 SMART WD40_4 253 293 IPR001680 GO:0005515
Lal21g0599 363 Gene3D - 73 344 IPR015943 GO:0005515
Lal21g0599 363 SUPERFAMILY WD40 repeat-like 24 296 IPR036322 GO:0005515
Lal21g0599 363 ProSitePatterns Trp-Asp (WD) repeats signature. 280 294 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0599 Lal-Chr21 4506309 4510711 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0599 K11805 - gmx:100782785 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0599 21 4506309 4510711 Lal21g0599 21 4506309 4510711 ECH