Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0580 ATGGAATTATTTTATTACACCGTGTTTGGAGGATTGGCAGCGATTGTTGCAGTTCTTGAACTAAGCAAGAACAATAAGGATCGAATTAACACTTCTTCCGCTTTCAATTCCTTCAAAAACAGTTACCTCCTTGTTTATTCTCTCATGATGGCGGGAGATTGGTTGCAAGGTCCATATGTCTACTACCTTTACAGTACATATGGATATGGGAAAGGAGAGATAGGACAACTGTTCATTGCTGGTTTTGGATCTTCCATGCTGTTTGGAACAATTGTGGGATCTCTAGCTGACAAACAGGGTCGAAAGAGGGCTTGTGTGACTTACTGCATCACCTACATTTTGAGCTGTATCACCAAACATTCTCCTCAATACAAAGTCTTAATGTTGGGGCGTATTTTGGGAGGTATTGCCACGTCACTTCTGTTTTCAGCATTTGAATCTTGGCTTGTTGCTGAACACAACAAGAGGGGTTTCGAACAACAATGGCTGTCATTAACATTCTCAAAGGCTATATTTCTTGGAAATGGTCTTGTTGCTATCGTGGCTGGGCTGTTTGGAAATGTCCTTGTTGATACATTGGCTCTTGGACCAGTGGCCCCCTTTGATGCTGCTGCATGTTTTCTTGCTATTGGTATGGCTGTCATATTATCTTCATGGACAGAAAATTATGGAGATACTTCCGAGAACAAGGACTTGCTTACTCAATTCAGGGGTGCTGCTGTGGCCATTGCCTCTGATGAAAAAATTGCATTGCTAGGGGCAATACAGTCTCTCTTTGAGGGTTCAATGTATACCTTCGTGTTCCTATGGACCCCTGCTTTGAGCCCAAATGATGAAGACATTCCCCATGGTTTTATTTTTGCAACATTCATGTTATCCTCAATGTTGGGAAGCTCAATTGCATCTAAGTTGATGGCCCGTTCAGCACTTCGAGTAGAGAGCTACATGCAGCTTGTTTTTGCAGTTTCTTCTGCTGCTCTGCTGCTTCCCATTCTGACCACTTTCTTGGTAGTTCCTACCAAAGTGAAAGGTGGAAGCATCTCATTCGCCGGTTGTGTTCAACTTCTTGGCTTCTGTGTTTTTGAGAGTTGTGTTGGCATATTCTGGCCATCCATTATGAAGATGAGATCTCAATACATTCCCGAGGAGGCCCGGAGCACCATCATGAACTTTTTCCGCATTCCTCTAAACATTTTTGTGTGCGTTGTGCTGTACAATGTTAACGCATTCCCTATCACTGTTATGTTTGGCATGTGCTCAATTTTCCTTATGGTGGCATGTATTTTACAAAGGCGACTGATGGCGATTGCCGAAAAGCCAAAAACAGAAGATTGGCAATTGAAGGAAAGGGACACTGAGACAGAGCCATTGAACCTCTAA 1380 0.429 MELFYYTVFGGLAAIVAVLELSKNNKDRINTSSAFNSFKNSYLLVYSLMMAGDWLQGPYVYYLYSTYGYGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKVLMLGRILGGIATSLLFSAFESWLVAEHNKRGFEQQWLSLTFSKAIFLGNGLVAIVAGLFGNVLVDTLALGPVAPFDAAACFLAIGMAVILSSWTENYGDTSENKDLLTQFRGAAVAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEDIPHGFIFATFMLSSMLGSSIASKLMARSALRVESYMQLVFAVSSAALLLPILTTFLVVPTKVKGGSISFAGCVQLLGFCVFESCVGIFWPSIMKMRSQYIPEEARSTIMNFFRIPLNIFVCVVLYNVNAFPITVMFGMCSIFLMVACILQRRLMAIAEKPKTEDWQLKERDTETEPLNL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0580 459 Gene3D MFS general substrate transporter like domains 41 431 IPR036259 -
Lal21g0580 459 Pfam Sugar-tranasporters, 12 TM 4 358 IPR008509 GO:0015098|GO:0015689|GO:0016021
Lal21g0580 459 PANTHER MOLYBDATE-ANION TRANSPORTER 1 458 - -
Lal21g0580 459 CDD MFS_MFSD5_like 35 431 - -
Lal21g0580 459 PANTHER SAM (S-ADENOSYL METHIONINE) TRANSPORTER 1 458 IPR008509 GO:0015098|GO:0015689|GO:0016021
Lal21g0580 459 SUPERFAMILY MFS general substrate transporter 42 448 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0580 Lal-Chr21 4321034 4326219 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0580 K24175 - gmx:100799378 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0580 21 4321034 4326219 Lal21g0580 21 4321034 4326219 ECH