Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0575 ATGGTAGAGTGGCAACCTCTTCTTCAATCAATCTTCATAGGTCTCATAATCTCTTACCTCATCGCTAAGCTCATTTCCCTCGTCGTTTCTTTCAATCACGAAAACGCCACCGTTTCATCCACCACAACCACCACCACCGATATCAAACCCAATCTACCCGATGCCGCCAAACGCGACGACACCGTTTCAGAAATCAACCACCCTTTCGAGGCCGAATCGGTAATGGCCGAGCAAGGTAGCGTAAGAAACGACAGCGATGATGATCGGGATCAGTATGATGATGATTGGGAAGGAGTGGAAAGTACTGAGCTTGATGAAGTTTTCAGCGCCGCCACGGCTTTTGTAGCTGCCTCCGCCGCTGACCGGTTGTCGCAGAAGGTTTCGAATGATATGCAGCTTCAGCTTTATGGTTTGTATAAAATTGCCACTGAAGGTCCTTGTAGTACGCCACAGCCTTCGCCTCTAAAAATGACTGCTCGAGCTAAATGGCAAGCTTGGCAGAAACTGGGTGCTATGCCTCCTGAAGATGCAATGCAGAAGTACATTGATATTGTGTCAGGGTTATATCCTTCTTGGCTTGATGGTTCATCTTTGAAGAGCAAAAGTGGTGATGGCGGTGGCTCTAGTTCAGAGGCTAAGGGACCAATGGGACCAGTATTCAGTACTTTTGTTTATGAAGAGGACTATGGAAGTGACTCGAAAATGGATGCAATTCATGGATTTGCTAGGGAAGGTGATACGGCTAATCTGCTGATGTGTATTGAAAATGGTGTCTCAGTGAATTTGAAGGACAGTGAGGGCCGGACCCCATTACACTGGGCTGTAGATCGTGGCCACCTTGATGTCACAGAGCTGCTTGTTGGCAAGGATGCTGATGTAAATGCCAAGGATAATGATGGACAAACTCCATTGCATTATGCTGTTACTTGTGAGAGAGAAGCAATAGCTGAGTATTTAGTAAAGCATAATGCAGACACACATGCGAAGGATAACGATGGCTGCTCCCCGCGCGACGGCTCTGAATCGAAGTGGCCGTGTCTGCAGCAGCAGCACCTTGTGGGAGAAGTAAACTGA 1074 0.4758 MVEWQPLLQSIFIGLIISYLIAKLISLVVSFNHENATVSSTTTTTTDIKPNLPDAAKRDDTVSEINHPFEAESVMAEQGSVRNDSDDDRDQYDDDWEGVESTELDEVFSAATAFVAASAADRLSQKVSNDMQLQLYGLYKIATEGPCSTPQPSPLKMTARAKWQAWQKLGAMPPEDAMQKYIDIVSGLYPSWLDGSSLKSKSGDGGGSSSEAKGPMGPVFSTFVYEEDYGSDSKMDAIHGFAREGDTANLLMCIENGVSVNLKDSEGRTPLHWAVDRGHLDVTELLVGKDADVNAKDNDGQTPLHYAVTCEREAIAEYLVKHNADTHAKDNDGCSPRDGSESKWPCLQQQHLVGEVN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0575 357 ProSiteProfiles Ankyrin repeat region circular profile. 299 331 - -
Lal21g0575 357 Pfam Ankyrin repeats (3 copies) 239 330 IPR002110 GO:0005515
Lal21g0575 357 Gene3D - 98 209 IPR014352 -
Lal21g0575 357 ProSiteProfiles Ankyrin repeat profile. 299 331 IPR002110 GO:0005515
Lal21g0575 357 SUPERFAMILY Ankyrin repeat 230 337 IPR036770 -
Lal21g0575 357 PRINTS Ankyrin repeat signature 267 282 IPR002110 GO:0005515
Lal21g0575 357 PRINTS Ankyrin repeat signature 315 329 IPR002110 GO:0005515
Lal21g0575 357 ProSiteProfiles Ankyrin repeat region circular profile. 266 298 - -
Lal21g0575 357 MobiDBLite consensus disorder prediction 52 66 - -
Lal21g0575 357 Gene3D - 304 340 IPR036770 -
Lal21g0575 357 Gene3D - 229 303 IPR036770 -
Lal21g0575 357 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 104 194 IPR000582 GO:0000062
Lal21g0575 357 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 1 351 - -
Lal21g0575 357 PRINTS Acyl-coA-binding protein signature 127 145 IPR000582 GO:0000062
Lal21g0575 357 PRINTS Acyl-coA-binding protein signature 150 165 IPR000582 GO:0000062
Lal21g0575 357 PRINTS Acyl-coA-binding protein signature 171 188 IPR000582 GO:0000062
Lal21g0575 357 MobiDBLite consensus disorder prediction 326 346 - -
Lal21g0575 357 SMART ANK_2a 266 295 IPR002110 GO:0005515
Lal21g0575 357 SMART ANK_2a 299 328 IPR002110 GO:0005515
Lal21g0575 357 SMART ANK_2a 233 262 IPR002110 GO:0005515
Lal21g0575 357 ProSiteProfiles Ankyrin repeat profile. 266 298 IPR002110 GO:0005515
Lal21g0575 357 SUPERFAMILY Acyl-CoA binding protein 103 193 IPR035984 GO:0000062
Lal21g0575 357 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 2 1 351 - -
Lal21g0575 357 MobiDBLite consensus disorder prediction 39 93 - -
Lal21g0575 357 Pfam Acyl CoA binding protein 105 185 IPR000582 GO:0000062
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0575 Lal-Chr21 4272352 4278367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0575 1 350 Acyl Lipid Metabolism Gene Families AT5G53470 61.143 1.29e-140 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0575 - - gmx:100816670 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0575 21 4272352 4278367 Lal21g0575 21 4272352 4278367 ECH