Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0530 ATGGCGGAAGAGAAGAAAGCTCCTCCGTCGTCTTCGTTCGTCAAAAAGGGCGACCGGCAAATCTTCACGGTGGAGCTCCGGCCAGGTGAGACCACAATAGTGTCGTGGAAGAAGCTTATGAAAGACGCTAATAACAATAAGAACAACGATGATAATAATATTACTGGATCCAATTCTTCTTCACCTCCTCCACATGTTCACAATGCTCTTCACTCCAGAATCGCTCCGGGACAACATGCTGAGGTTGAAGAAAAGGATCCTTCTCAGCCAAACCGTTTCAGTGCTGTAATAGAGAAGATTGAACGCCTCTATATGGGTAAGGATAGTAGTGATGAGGAGGATATGCGTGATGTTCATGATGATCAGTATGATACAGAAGACTCTTTTATTGATGATGCTGAGCTGGATGAATATTTTGAGGTTGATAATTCTGCAATAAAACATGATGGGTTCTTTGTAAATAGGGGGAAATTGGAACGCATAAATGAGCCTCCTGTATTACCGAACCAGCAGCCAAAGAAAAGGCGCAGAAAAGATATACCGAAGAATCCTGACGAAAATACTGATGATCAAGGATCTAATAAACATGTAAAAGGAAGCAGGCGAGCATCAGGAAAAACTGCTTCACTAAAGGGGAAGAATACATCTAATTCCTCCCAGAATTTGATTGCACCTGATGAATATTACAAAGACTTGAAAGTTCAGAATAAATCTGATGTCCCTGGAAATGGAATTAGTTCAAAAAAGAAAACTGCTGATACTAAATCAACACTGGACCCTTCTGTCTCTTTGCAAGCATCAAAAGATGATGTTCTCAGTTCTGTCAAAGAAGCAAAAGATGCTGATAAGCCGAAGACAGGAGTTATTCAATCTAAGAAGATCAGTGATAAATATAAAGATGCAAGTGGATTTCTTGGTGCATCTCATCAGAAGTACCATGAACAAGGTGCTCATGCACATTCCAATTCCCAACCTGGAAGATCCTCAAGTGATTCGAAAATTACTAGTCATTCAAAAGAAAAAAAGGTTATGCGTGAACTGCCAGATCTGAACTTGTCCGAGGAAAAGTCTACTATGCAAATAACAAAATCTGAATACATGCACAAAAAAGATGGTTCTAGTATCAGGACAAAAAATTCAGCCCTTGAAAAGGCTATCCGCGAGTTAGAGAAGATGGTGGCAGAATCAAGGCCTCCTGCAATGGAACACCAGGAGGCTGATACCACATCCCAGGCAGTGAAAAGGAGGTTGCCTAGAGAAATAAAGCTGAAGCTCGCTAAAGTTGCTAGATTAGCGCAGGCAAGCCAAGGGAAAGTATCGAAGGAGTTACTTAACCGTCTTATGAGTATTCTTGGGCACCTGATGCAGCTCAGGACATTAAAGAGAAATTTAAAAGAAATGATCAGTACAGGTCTGTCAGCAAAGCAGGAGAAAGATGTTAGGTTTCAACTGATAAAGAAGGAAGTTGTTGAAATGATTAGGGTACAGGCCCCGACCTTGGCATCCAAGCAGCAAAAAGCTGGAGCATCTGGCGATTTTCAAGAATTTGGCCCTGATGGAAAAGCAATTACTAAATGCAAGTTCAGTATGAACACTGCACTAGAAGACAAGATTTGTGATCTCTATGACCTTTTTGTTGATGGGTTGGATGAAAGTGCAGGTCCGCAAATCAGAAAGTTGTATGCTGAGCTTGCGGAATTATGGCCAAATGGTTGCATGGACAACCATGGGATCAAACATGGAATTTGCAGGGCAAAAGAGAGGCGAAGAGCCTTGCACAGCAAACACAAGGATCTGGAAAAAATGAAGAAGAAGAAACTGTTGGTACCTAAGCCAGAGGAGAATGTTCTACCTGATACTAGTTCAAATCCTCCACAGCAGAGTTCGCGAGAGAAAGTAGCTCCACAAACTAGCGGTCATGCTTTTACTTCAGTGAAGAAGCCAGTTTCTTATATGAGCACTACTTCCCAGGTCCCAAGTCCTATGAATGGTCTAAAACAAGAAAAAGCGAGGAAAAGTTCAAGCAGTTCCGTGGATAATGTCAACATTGAGAATGGTGGTTTAACAAAGAAGAAAGTAAAGAGAAAACCAGAACATGACTTGGAAGTTGCACATTTTGGTCCTGAGAAGAAGAAGCCAAGTTCTTTGATGGGGGAAGCAAGGCCAAAGTCCCTGGTCTAG 2181 0.4177 MAEEKKAPPSSSFVKKGDRQIFTVELRPGETTIVSWKKLMKDANNNKNNDDNNITGSNSSSPPPHVHNALHSRIAPGQHAEVEEKDPSQPNRFSAVIEKIERLYMGKDSSDEEDMRDVHDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERINEPPVLPNQQPKKRRRKDIPKNPDENTDDQGSNKHVKGSRRASGKTASLKGKNTSNSSQNLIAPDEYYKDLKVQNKSDVPGNGISSKKKTADTKSTLDPSVSLQASKDDVLSSVKEAKDADKPKTGVIQSKKISDKYKDASGFLGASHQKYHEQGAHAHSNSQPGRSSSDSKITSHSKEKKVMRELPDLNLSEEKSTMQITKSEYMHKKDGSSIRTKNSALEKAIRELEKMVAESRPPAMEHQEADTTSQAVKRRLPREIKLKLAKVARLAQASQGKVSKELLNRLMSILGHLMQLRTLKRNLKEMISTGLSAKQEKDVRFQLIKKEVVEMIRVQAPTLASKQQKAGASGDFQEFGPDGKAITKCKFSMNTALEDKICDLYDLFVDGLDESAGPQIRKLYAELAELWPNGCMDNHGIKHGICRAKERRRALHSKHKDLEKMKKKKLLVPKPEENVLPDTSSNPPQQSSREKVAPQTSGHAFTSVKKPVSYMSTTSQVPSPMNGLKQEKARKSSSSSVDNVNIENGGLTKKKVKRKPEHDLEVAHFGPEKKKPSSLMGEARPKSLV 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0530 726 MobiDBLite consensus disorder prediction 593 726 - -
Lal21g0530 726 Coils Coil 375 395 - -
Lal21g0530 726 MobiDBLite consensus disorder prediction 170 197 - -
Lal21g0530 726 MobiDBLite consensus disorder prediction 616 684 - -
Lal21g0530 726 MobiDBLite consensus disorder prediction 688 717 - -
Lal21g0530 726 MobiDBLite consensus disorder prediction 207 224 - -
Lal21g0530 726 MobiDBLite consensus disorder prediction 104 128 - -
Lal21g0530 726 MobiDBLite consensus disorder prediction 272 299 - -
Lal21g0530 726 MobiDBLite consensus disorder prediction 239 270 - -
Lal21g0530 726 MobiDBLite consensus disorder prediction 317 332 - -
Lal21g0530 726 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 1 725 - -
Lal21g0530 726 MobiDBLite consensus disorder prediction 42 70 - -
Lal21g0530 726 Pfam HPC2 and ubinuclein domain 119 159 IPR014840 -
Lal21g0530 726 MobiDBLite consensus disorder prediction 42 66 - -
Lal21g0530 726 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 1 725 - -
Lal21g0530 726 MobiDBLite consensus disorder prediction 162 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0530 Lal-Chr21 3837655 3845303 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0530 - - gmx:100793966 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0530 21 3837655 3845303 Lal21g0530 21 3837655 3845303 ECH
Lal21g0530 21 3837655 3845303 Lal4g0431 4 2999421 3014650 LSH