Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0525 ATGAACTCATTGAATTTGAGATTGAAACCCATAGCCACCATGAAGAGAAAAAGAACGATAAAAAAACCGGTTGCGCCACCTCCCTCCACCACTCCACCACCAACACAAACCAAAACCCTCCGCAAAACCCACAACTCCACACCAAAACCACCAAGCACCGTTACCAAATCCCTAAAATTTCCAGAACCTTCTTCCGATTATGTATGGGTCCCACTAAATCTCACTCGCGAAGAGCTCTCCTTACCCTTAACCTTCCCAACCGGTCAAACCTTCCGCTGGAAAAACACCGCACCTTCTCAATACACCGGCGTCGTTGGGTCCCACATCATATCCCTCACTCACCTCCAAAACGGCGACGTTTCATATTTCCTTCACAGAACTCACGATGCCGTTTCCGCCAGAACGGCGCTGCTCGATTTTCTCAACGCCGGCGTGTCCCTCGCCGGAATCTGGAAGGTGTTCTCGGATTCCGACGAGAGGTTTGCTGAGCTGGCGAAGTATTTTGGTGGGGCCCGCGTGCTGAGGCAGGAACCGTTCGAGTGTTTGATTCAGTTCTTGTGTTCTTCGAATAACAACATTGGGAGGATTACGAAGATGGTGGATCATGTTTCGTCTATGGGGAATTACTTAGGGTCTGTTGAAGGTTTTACGTTCCATGCTTTCCCTACGTTGGAGCAGCTTTCTTTGGTTTCAGAGGAAGATCTTAGAAAAGCTGGTTTTGGTTATAGGGCTAAGTATATAATTGGCACGGTGAATGCTTTGCAATCAAAAACTGGTGGAGGAGAAGAATGGCTTCGGTCTCTGCGCAAGTTGGATCTTGAAGATGTTATATCTGCCCTTTCTACTTTACCTGGAGTAGGTCCTAAAGTGGCAGCTTGCATAGCTCTCTTCTCGCTTGATCAACACCATGCCATTCCTGTTGACACACATGTGTGGCAGATTGCCACAAAGTATCTCTTACCTGAGCTTGCAGGTTCCCGGTTGACACCAAAGCTCTGCAATCGTGTTGCAGAGGCATTTGTAACCAAGTATGGTAAATATGCTGGCTGGGCTCAAACTCTACTATTCATAGCTGAATTACCTTCACAAAAGGTCCTCCTACCTTCACATTTGTGGACTACTGATCAGCACAATCACACAAAGAAACAAAACAGTGAATTACTTGTGAATTCTAAAGATGGCGTGGCTCTCCGGATATAA 1200 0.4692 MNSLNLRLKPIATMKRKRTIKKPVAPPPSTTPPPTQTKTLRKTHNSTPKPPSTVTKSLKFPEPSSDYVWVPLNLTREELSLPLTFPTGQTFRWKNTAPSQYTGVVGSHIISLTHLQNGDVSYFLHRTHDAVSARTALLDFLNAGVSLAGIWKVFSDSDERFAELAKYFGGARVLRQEPFECLIQFLCSSNNNIGRITKMVDHVSSMGNYLGSVEGFTFHAFPTLEQLSLVSEEDLRKAGFGYRAKYIIGTVNALQSKTGGGEEWLRSLRKLDLEDVISALSTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIATKYLLPELAGSRLTPKLCNRVAEAFVTKYGKYAGWAQTLLFIAELPSQKVLLPSHLWTTDQHNHTKKQNSELLVNSKDGVALRI 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0525 399 Pfam HhH-GPD superfamily base excision DNA repair protein 183 318 IPR003265 GO:0006284
Lal21g0525 399 MobiDBLite consensus disorder prediction 1 57 - -
Lal21g0525 399 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 69 383 - -
Lal21g0525 399 SUPERFAMILY TATA-box binding protein-like 63 176 - -
Lal21g0525 399 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 72 182 IPR012904 GO:0003684|GO:0006289|GO:0008534
Lal21g0525 399 Gene3D - 152 360 IPR023170 -
Lal21g0525 399 Gene3D - 62 140 - -
Lal21g0525 399 PANTHER N-GLYCOSYLASE/DNA LYASE 69 383 - -
Lal21g0525 399 SMART endo3end 187 360 IPR003265 GO:0006284
Lal21g0525 399 SUPERFAMILY DNA-glycosylase 177 358 IPR011257 GO:0003824|GO:0006281
Lal21g0525 399 MobiDBLite consensus disorder prediction 35 57 - -
Lal21g0525 399 Gene3D Hypothetical protein; domain 2 177 301 - -
Lal21g0525 399 CDD ENDO3c 179 357 IPR003265 GO:0006284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0525 K03660 - gmx:100789749 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0525 21 3793974 3797986 Lal21g0525 21 3793974 3797986 ECH