Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0524 ATGAAAATTCAAACCTCATCGATCTTTTTCTTATTAACCGTTCTCACCACGGTGTCGCTCGCCAATAAGTTAAATTCCGCCACCTTCGACGGCGCCATATACTCCGATCAAACATGCAACGACAAAAAACAATGCGTCTCTCCATCCTCCTTCAAAAACAACAACACGGCGATAGCAACACCGGCAACGGGGACGGATTGTGAGGTGTGGAGCAAGGAGTGTTCGGAGGCGGTTCTGAGCATGGCGCGGTCGCCGGAGATGGTAGAGTGGATAAGAAAGATAAGAAGAAGGATTCATGAAAATCCGGAACTAGCATTTGAAGAAATCGAAACGAGTGGTTTAATAAGAAAAGAGTTGGATATGATGAAAATTAGTTATCGGTATCCGCTAGCGAAGACTGGTATTCGTGCTTGGATCGGAACTGGTGGTCCTCCTTTTGTTGCCATTAGAGCTGACATGGATGCGCTTCCTATCCAGGAAGCTGTGGAATTGAAGTACAAGTCTAAAGTTGCTGGTAAAATGCATGCTTGTGGGCACGATGCACATGTGGCTATGCTTATGGGTGCTGCAAAGATATTGAAAAGTAGAGAACATTTGTTAAAGGGAACTGTTATTCTGCTATTCCAACCAGGGGAGGAAGCTGGTAATGGTGCAAAGAAAATGATACAAGATGGTGCTTTGGAAAATGTGGAAGCTATATTTGGAGCTCATGTATTCCATAACATTGAAACTTCTATAATTGGTTCAAGGCCTGGATCCTTTCTTGCAGGCTGTGGAATTTTCAGAGCTGTTATTAGTGCCAAAAAGGGCACTTCTACAAATCCACACCACTCTACAAATCCTGTTTTGGCTGCTTCAGCTGCAATAATTAGCTTACAGGGTCTTGTTTCCCGAGAATCAGACCCATTGGATTCACAGGTTGTTTCTGTGACTTTGTTCAATGGTGCAGACAATCATGACATTATACCAGACACAGTGGTCATTGGTGGAACTTTCAGAGCTTTCTCTAACACTACCTTTTACTATCTACTTGAAAGAATAAAGCAGGTGATTGTGGAACAGTCTAGTGTATTTAGATGCTCTGCTGAAGTTAACTTCTTTGAAAACGAAAACAGCATTTATCCTCCAACAATCAATGATGAAAAGATGTATGAACATCTAAAGAAGGTGTCCATTGATTTGTTGGGCCAAAAGAATTTCATGGTAGTACCACCTGTGATGGGTTCTGAAGATTACTCATTCTATTCACAAGTGATTCCCTCAACATTCTATTTCATAGGAATAAGGAATGAAACACTTGGGTCTACTGTTACAGGACACTCTCCACATTTCAACATTGATGAAGATGTTCTACCAACAGGTGCAGCTACACATGCTACCATTGCAGAAAGGTACCTTATTGAACACGGCAAATGA 1416 0.4195 MKIQTSSIFFLLTVLTTVSLANKLNSATFDGAIYSDQTCNDKKQCVSPSSFKNNNTAIATPATGTDCEVWSKECSEAVLSMARSPEMVEWIRKIRRRIHENPELAFEEIETSGLIRKELDMMKISYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVELKYKSKVAGKMHACGHDAHVAMLMGAAKILKSREHLLKGTVILLFQPGEEAGNGAKKMIQDGALENVEAIFGAHVFHNIETSIIGSRPGSFLAGCGIFRAVISAKKGTSTNPHHSTNPVLAASAAIISLQGLVSRESDPLDSQVVSVTLFNGADNHDIIPDTVVIGGTFRAFSNTTFYYLLERIKQVIVEQSSVFRCSAEVNFFENENSIYPPTINDEKMYEHLKKVSIDLLGQKNFMVVPPVMGSEDYSFYSQVIPSTFYFIGIRNETLGSTVTGHSPHFNIDEDVLPTGAATHATIAERYLIEHGK 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0524 471 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 36 469 - -
Lal21g0524 471 CDD M20_IAA_Hyd 91 466 IPR044757 GO:0009850|GO:0016787
Lal21g0524 471 Gene3D - 256 375 - -
Lal21g0524 471 Pfam Peptidase family M20/M25/M40 148 463 IPR002933 GO:0016787
Lal21g0524 471 PANTHER PEPTIDASE M20 FAMILY MEMBER 36 469 IPR017439 GO:0016787
Lal21g0524 471 SUPERFAMILY Zn-dependent exopeptidases 84 468 - -
Lal21g0524 471 PIRSF Amidohydrol_AmhX 78 470 IPR017439 GO:0016787
Lal21g0524 471 Gene3D Zn peptidases 93 459 - -
Lal21g0524 471 TIGRFAM amidohydrolases: amidohydrolase 92 454 IPR017439 GO:0016787
Lal21g0524 471 SUPERFAMILY Bacterial exopeptidase dimerisation domain 257 366 IPR036264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0524 Lal-Chr21 3780622 3786748 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0524 K21604 - gmx:100785666 680.248