Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0488 ATGGCCCAGGGAACAACAACATTTATCACTAATCCCTTGTTCTCTTTGTCCCCTCGTACCCCATCAAAAATCACTTCATTCAACCACTTCATCACCACGCGCTTCTTCTCACCGCCTTCACCTCCTTCTCTATCTTCACTTCAACTTCGACCTTCTTCTTCTATGGTTATCGTCCACGCCAATTCCAACCCAATCGATTCCATTTCAATTGAGAATGAGAAGGAAATCAGCCATAGCAGCGCAAACTTGTTGGCTTGTCCTGTATGTTATCAACCCTTGACTTGGATTACTGATCCTCGCTTTTCAATAGATGCTATCCCTGGATCTACTTTACAATGTAGCACCTGTCAGAAAACATATGCTGGTAACCAAACACACATTGATCTCATCACAACAGGTGAAACTAAGAACAATGATGAACCAATGCCACTTTCCACAGAGCTTTTCAGGCATGAAAGTTTCCTTCTCTTTTTCTTTATATCAAATGTTCTTCCCCAGGTCTTTATTTGCATTTGGTTGCCCTTAGTATCATATCTCTATGAGAGAGGCTGGCGTCAAACTTTCACTATATTGGGTGGTTTTCCTGGTGCTGAGAAAGAGTTTGAAATCATGAAGGGCTTCCTAAAGCCAGTACTGGGTGGAAATATCTTGGACGCTAGTTGCGGAAGTGGATTATTTTCAAAATTATTTGCAAAGAGTGGACTGTTTTCTTTGGTTGTTGCTCTTGACTACTCAGAAAACATGTTGAAACAATGTTATGAGTTCATTCAGCAGGAAGAGAACTTTCCAAAAGAGAACTTCACCTTGGTCAGAGCAGACATATCTAAACTGCCTTTTGTTTCAAATTCAATTGATGCTGTGCATGCGGGTGCAGCTATCCACTGCTGGCCTTCACCATCAGCTGCTATTGCTGAAATAACTCGAGTTTTGCGACCTGGAGGTGTCTTTGTCGCGACCACCTTCGTACTTGATGGGCCTCTTTCCTATGTCCCGTTTTTAAATCAAATAACTAAGAATACTGGGGGATTCTCCTTCCTCTCAGAACGTGAACTTGAAGATCTCTGCAGAGCAAGTGGGCTGGTTCAATTTAAATGCATAAGAAATAGGCGTTTCGTTATGATTTCTGCTACAAAGCCCATTTAA 1143 0.4191 MAQGTTTFITNPLFSLSPRTPSKITSFNHFITTRFFSPPSPPSLSSLQLRPSSSMVIVHANSNPIDSISIENEKEISHSSANLLACPVCYQPLTWITDPRFSIDAIPGSTLQCSTCQKTYAGNQTHIDLITTGETKNNDEPMPLSTELFRHESFLLFFFISNVLPQVFICIWLPLVSYLYERGWRQTFTILGGFPGAEKEFEIMKGFLKPVLGGNILDASCGSGLFSKLFAKSGLFSLVVALDYSENMLKQCYEFIQQEENFPKENFTLVRADISKLPFVSNSIDAVHAGAAIHCWPSPSAAIAEITRVLRPGGVFVATTFVLDGPLSYVPFLNQITKNTGGFSFLSERELEDLCRASGLVQFKCIRNRRFVMISATKPI 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0488 380 PANTHER METHYLTRANSFERASE 54 379 - -
Lal21g0488 380 CDD AdoMet_MTases 215 323 - -
Lal21g0488 380 Pfam Methyltransferase domain 217 317 IPR013216 GO:0008168
Lal21g0488 380 PANTHER OS08G0411200 PROTEIN 54 379 - -
Lal21g0488 380 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 179 378 IPR029063 -
Lal21g0488 380 Gene3D Vaccinia Virus protein VP39 195 375 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0488 Lal-Chr21 3473361 3487142 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0488 - - gmx:100819297 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0488 21 3473361 3487142 Lal21g0488 21 3473361 3487142 ECH
Lal17g0417 17 2800640 2804589 Lal21g0488 21 3473361 3487142 LSH