Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0486 ATGCAAGGTGACATCATCCATTACCAGCACCATAAACAACAACACTCTCCTCCAATTTTCTTCAATTCGAGTTCAGATTTCGGTTCATCAATTAGCGGCGGTTTGTTTCTTGAACCCACAGTTCCCGATTCCTTCATTCGTTTGTTAAGAATTTATCCTGAATCGAATCCCCAACGTAGGGTTCGTAGTAGTGGTGCTTTGTTTTTATCGGTTACTTTGCCAAATGAAGAAGGTAAACGTTTTCCCGAACACAAGTCATACATTGTTCAGAAACAACAAAGGAAGGTTCACACTGTTAATAACCGTGTACGAGGGGGAAGTGCTGTTAACACTACCAAACATCTATGGGCTGGTGCAATAGCTGCTATGGTTTCTAGAACTTGTGTTGCCCCACTTGAAAGACTTAAGCTGGAATATATAGTCCGTGGTGAGAAGAGGAATATATTGGAGCTTATTAAGACAATTGCTATTACTCAAGGATTAAGGGGCTTTTGGAAGGGCAACCTTGTAAATGTTCTACGAACTGCTCCATTCAAGGCTGTTAACTTTTATGCATATGATACGTATAGAAAGCAGCTTCTCAGGTTCTCCGGAAATGAGGAAACTACCAATTTTGAGAGGTTTATTGCTGGTGCTGCTGCTGGGATCACTGCTACCAGTATTTGCCTCCCACTTGACACTGAACCGATTAACAAGCTTCTAGTTGTATTTCTCCTACATCTGTCTGTTCCTCAGGCAATGATCCGGACAAAGTTGGTGGCACCAGGTGGGGAGGCTTTAGGTGGTGTAATTGGTGCTTTCCAATACATGGTTCGAACTGAAGGAATCTTTTCTCTTTACAAGGGTTTAATACCATCAATTATAAGTATGGCTCCTTCTGGTGCTGTGTTTTACGGTGTATACGATATTTTGAAATCAGCATATCTGCATTCACCAGAAGGAATGAAGAGAATCAAGAACTTGCATAAACAGGGGCAGGAACTGAGTGCCTTTGATCAGCTTGAGTTGGGACCGGTACGGACATTGTTATATGGGGCTATTGCTGGTGCATGTGCAGAAGCTGCTACATACCCATTTGAAGTGTTAAGGAGGCAGCTTCAAATGCAAGTCCAGTCTACTAAATTAAGTACTTTAGCAACTTTTGTCAAAATAGTGGAACATGGTGGCATTCCAGCTCTCTATGCAGGACTTATTCCCAGCTTGTTACAGGCATGTAAATTCTTACCTCCTTGGCACATTGTACCATGCACTGATCACAAGCCAGTTTTGCTTCCAATTGTACTTCCTTCAGCTTCAATAAGTTACTTTGTCTATGAGTGCATGAAGATTGTTCTCAAAGTGGAGTAG 1347 0.4195 MQGDIIHYQHHKQQHSPPIFFNSSSDFGSSISGGLFLEPTVPDSFIRLLRIYPESNPQRRVRSSGALFLSVTLPNEEGKRFPEHKSYIVQKQQRKVHTVNNRVRGGSAVNTTKHLWAGAIAAMVSRTCVAPLERLKLEYIVRGEKRNILELIKTIAITQGLRGFWKGNLVNVLRTAPFKAVNFYAYDTYRKQLLRFSGNEETTNFERFIAGAAAGITATSICLPLDTEPINKLLVVFLLHLSVPQAMIRTKLVAPGGEALGGVIGAFQYMVRTEGIFSLYKGLIPSIISMAPSGAVFYGVYDILKSAYLHSPEGMKRIKNLHKQGQELSAFDQLELGPVRTLLYGAIAGACAEAATYPFEVLRRQLQMQVQSTKLSTLATFVKIVEHGGIPALYAGLIPSLLQACKFLPPWHIVPCTDHKPVLLPIVLPSASISYFVYECMKIVLKVE 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0486 448 PRINTS Mitochondrial carrier protein signature 114 127 IPR002067 GO:0055085
Lal21g0486 448 PRINTS Mitochondrial carrier protein signature 127 141 IPR002067 GO:0055085
Lal21g0486 448 PRINTS Mitochondrial carrier protein signature 167 187 IPR002067 GO:0055085
Lal21g0486 448 PRINTS Mitochondrial carrier protein signature 280 298 IPR002067 GO:0055085
Lal21g0486 448 PRINTS Mitochondrial carrier protein signature 345 367 IPR002067 GO:0055085
Lal21g0486 448 Gene3D Mitochondrial carrier domain 106 408 IPR023395 -
Lal21g0486 448 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 307 IPR018108 -
Lal21g0486 448 ProSiteProfiles Solute carrier (Solcar) repeat profile. 336 421 IPR018108 -
Lal21g0486 448 PANTHER SOLUTE CARRIER FAMILY 25 27 227 - -
Lal21g0486 448 PANTHER SOLUTE CARRIER FAMILY 25 423 448 - -
Lal21g0486 448 PANTHER SOLUTE CARRIER FAMILY 25 242 404 - -
Lal21g0486 448 SUPERFAMILY Mitochondrial carrier 108 404 IPR023395 -
Lal21g0486 448 Pfam Mitochondrial carrier protein 109 194 IPR018108 -
Lal21g0486 448 Pfam Mitochondrial carrier protein 244 309 IPR018108 -
Lal21g0486 448 Pfam Mitochondrial carrier protein 336 403 IPR018108 -
Lal21g0486 448 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 192 IPR018108 -
Lal21g0486 448 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 242 404 - -
Lal21g0486 448 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 423 448 - -
Lal21g0486 448 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 27 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0486 Lal-Chr21 3456667 3459669 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0486 28 403 Organic Solute Cotransporters AT5G64970 59.158 8.49e-156 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0486 - - gmx:100816623 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0486 21 3456667 3459669 Lal21g0486 21 3456667 3459669 ECH