Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0482 ATGTTCTCAACGGCAATTTCTGTGAAGGAACCAGCTTCATCTTCTGCTGCTATGGCCCTCTGTAAATGCATCCCTATTTTTACCAGAAGGAGGGACAAAAATAAGGGTACTGAAAAATCTTCAAAAAAGGACATCAAAACTCTACATGCCAAAATACAACAGCCGCATATATCATCGGATATTAATGATTTGAAGTCAGGGACTCTTGATGTGACAGTACCCCCTACTAGTATCCAGAAGATTTCAAGGAGTAATATAAGGGTGATGAGTCTTGAGAGTCCTGTGAAGGCTGAAGCTGAGGATGCTTATGAAGGGGGAGACGAGCATGATGATTCACCCTCCGTCAAGTGGGAAGTCTCTGATTTTGATCTCCAAGTCCATGAAGTCGTGACGAGCGAAGGAGGATATGATCATACAGATAAGGAGATGAAGTTTCCCAGATTATATCACAACAAAGCGGCAAACATTCAATTGGAAGGCAAAGATGATACCTACAGCAAAACGGGTGTTGATACAATCCAAAGTGGGCATGTAAGTGATCCTGGGATTTGCAAGGCAGACTTCTCTGGTTCTCCGAAGCTCACACGGTCCTGCTCTAACCTGGAAAGGACGGTTGTGCTTAGAGAGAAAACTCTTCACTTTCTATCTTCAAATCCACAATCTTTTGAGGATTTGCAGGATTTATCAGCAAATCAGATGGCTAATGTTGGAAGTCCCCAGTCTGTGATGACTCATCTCAGTGCTGATAAAGTGATGCTGAAAAGGCATTCATCAAGTCAAGTTCTCCCTTCTAGAAGTAAAAGGTTGTGGTGGAAGTTGTTCATCTGGAGCCATAGGAATATACATAGACTTCAGTTAAGCAAATCGACACAATTGCATTCTTCAAGCACAACTTTAAAAAATCAATGTGGGTACTCCTCAGACACCCTCGAACCAAAGAAGGGCAAGGCTTTGATGAGGCGTGTGGAATCAACCTCACCAGGGTCCTCTTCTGGGGAATACTTCGACAAAAGCCGCATTGATAAAAATACTAATAACCAAAGGTGGAGCAGATTTCACAGTGAAGGTTCTGGTTTTTCGTCACAGAACCAATGGGTGGCTTTCACGACAGAATCATCCCCATTTAACAGAGTGGATCAGTGGGTGAAAGGTCTTGAAGTTCAGCAGCCACTGCCAGAGGATAATGATGATAACAATATGGGAAGCATTGTCTATCCACCTTCACCGGAGGCTAGTGCATCAATGGCACAAAACACAGCTCAGTTTGTTCGACAAGTAGATGCCAATCTCTCAAAGGAGATTTTGACTGCCAATAGCATGGTGCAGTCTTTGAGTCCAGCCTCAACTGTAGCACATATATCTGGGATTGGTATAAAAGTCATCCCAGCTATTTCACACTTCTTTGGTCTCCGCTCGGTCAATTTGTCTAGCAATTTCATAGTTAATATCACACCTGGACTTCTCCCAAAGGGTATTCATACACTTAATCTATCAAGGAACAATATTAGCACCATTGAGGGCCTCAGAGAACTAACCCGGCTGCGGGTACTTTACCTAAGTTACAATCGTATCTCTAGAATTGGACAAGGGTTATCAAGTTGTACACTTATCAAAGAGCTATATCTTGCTGGTAACAAGATAAGTGATGTAGAGGGGCTACACAGGTTACTAAAGCTAACAGTTCTGGACTTGAGCTTTAACAAAATCACAACAACAAAAGCATTAGGCCAGCTTGTGGCTAACTACAACTCGCTTCAGGTCCTTAATCTGCATGGAAATCCAATTGAAAGAAACATCAGTGATGACCAGCTACGAAAAAAAGTTTGCGGGCTTCTTCCAAAGCTCGTGTACCTGAATAAGCAACCTGTCAAGCCTCGTAGAGGAGGAGAAGTGCTCCCTGATAGTGTTGCCAAAGCTGCACTTGGGAGCAGCAGCTGGAGTAACAGAAGAGCACCGAGGAAAGGTGGCCATGGCCAAGGAGCATCGAGTTTCTCCAATGTGCATAGAAGCAGTCTTAGTGTTGCACAGAGAAGCAAGAGCATGACAAAGTACCGGACCAAAAATAAATAG 2070 0.4343 MFSTAISVKEPASSSAAMALCKCIPIFTRRRDKNKGTEKSSKKDIKTLHAKIQQPHISSDINDLKSGTLDVTVPPTSIQKISRSNIRVMSLESPVKAEAEDAYEGGDEHDDSPSVKWEVSDFDLQVHEVVTSEGGYDHTDKEMKFPRLYHNKAANIQLEGKDDTYSKTGVDTIQSGHVSDPGICKADFSGSPKLTRSCSNLERTVVLREKTLHFLSSNPQSFEDLQDLSANQMANVGSPQSVMTHLSADKVMLKRHSSSQVLPSRSKRLWWKLFIWSHRNIHRLQLSKSTQLHSSSTTLKNQCGYSSDTLEPKKGKALMRRVESTSPGSSSGEYFDKSRIDKNTNNQRWSRFHSEGSGFSSQNQWVAFTTESSPFNRVDQWVKGLEVQQPLPEDNDDNNMGSIVYPPSPEASASMAQNTAQFVRQVDANLSKEILTANSMVQSLSPASTVAHISGIGIKVIPAISHFFGLRSVNLSSNFIVNITPGLLPKGIHTLNLSRNNISTIEGLRELTRLRVLYLSYNRISRIGQGLSSCTLIKELYLAGNKISDVEGLHRLLKLTVLDLSFNKITTTKALGQLVANYNSLQVLNLHGNPIERNISDDQLRKKVCGLLPKLVYLNKQPVKPRRGGEVLPDSVAKAALGSSSWSNRRAPRKGGHGQGASSFSNVHRSSLSVAQRSKSMTKYRTKNK 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0482 689 MobiDBLite consensus disorder prediction 390 411 - -
Lal21g0482 689 Gene3D Ribonuclease Inhibitor 428 532 IPR032675 -
Lal21g0482 689 SMART LRR_typ_2 467 490 IPR003591 -
Lal21g0482 689 SMART LRR_typ_2 511 534 IPR003591 -
Lal21g0482 689 SMART LRR_typ_2 556 578 IPR003591 -
Lal21g0482 689 SMART LRR_sd22_2 511 533 - -
Lal21g0482 689 SMART LRR_sd22_2 534 555 - -
Lal21g0482 689 SMART LRR_sd22_2 489 510 - -
Lal21g0482 689 SMART LRR_sd22_2 556 577 - -
Lal21g0482 689 ProSiteProfiles Leucine-rich repeat profile. 491 512 IPR001611 GO:0005515
Lal21g0482 689 PANTHER NISCHARIN RELATED 22 687 - -
Lal21g0482 689 ProSiteProfiles Leucine-rich repeat profile. 536 557 IPR001611 GO:0005515
Lal21g0482 689 Gene3D Ribonuclease Inhibitor 533 627 IPR032675 -
Lal21g0482 689 MobiDBLite consensus disorder prediction 659 681 - -
Lal21g0482 689 Pfam Leucine Rich repeat 558 570 IPR001611 GO:0005515
Lal21g0482 689 SUPERFAMILY Outer arm dynein light chain 1 456 624 - -
Lal21g0482 689 MobiDBLite consensus disorder prediction 641 689 - -
Lal21g0482 689 MobiDBLite consensus disorder prediction 301 338 - -
Lal21g0482 689 ProSiteProfiles Leucine-rich repeat profile. 558 579 IPR001611 GO:0005515
Lal21g0482 689 Pfam Leucine rich repeat 469 524 IPR001611 GO:0005515
Lal21g0482 689 ProSiteProfiles Leucine-rich repeat profile. 513 535 IPR001611 GO:0005515
Lal21g0482 689 PANTHER OUTER ARM DYNEIN LIGHT CHAIN 1 PROTEIN 22 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0482 Lal-Chr21 3418434 3422231 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0482 - - gmx:100810094 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0482 21 3418434 3422231 Lal21g0482 21 3418434 3422231 ECH