Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0478 ATGGGCTATTTTGTTTCTTCTCACTGCTTTTTCAAAATCTTGTTTTTGTTATGCTTATTTCAGCTTTCCTTTGCTTCTAAGAAGCTGAATGAGCTAGTTGAGGATCAGTCTCAGCTTCTTCATTACCACAATGGTCCTCTTCTATATGGCAAAATTTCTATTAACCTCATTTGGTATGGTAATTTCAAACCATCCCAGAAAGCCATAATCACTGATTTCATCACCACTCTCTCCACCCAAACACCACAAAGCAACCAACCCTCTGTTGCCACGTGGTGGAAAACCACTGAGAAATACTACAACCACTGTAAACATAGATCACATGTCCCGAGCTGTGTCCCATTTCCTCTCTCTGTCTCACTCGGTAATCAAATTTACCAAAACTACACTCTTGGAAAATCACTTACCAATAAACACATTCTTCATTTGGCTTCAAAGGGAGACCAAAGAAACGCCATCAACGTTGTTCTTACATCTTATGATGTAACAGTTAAAGGGTTCTGTTCTCGATGTGGTACACACGGTTCTTCTTCTTCTTCTTCAAAGGTGATGGGTAAGAATAAGAACTACAAATTCGCTTATATTTGGGTTGGAAACTCTGAAACTCAATGCCCAGGTCAATGTGCATGGCCATTCCACCAACCAATCTACGGGCCTCAAAACCCACCATTGATTGCTCCTAACAACGACGTTGGTGTTGATGGAATGGTTATAAACCTAGCCACCCTATTAGCTGGAACCGTAACCAACCCATTCGGAAATGGTTACTTTCAGGGTCCATCTGAGGAGCCATTAGAAGCTGCAACAGCATGTCCTGGGGTTTATGGTAAAGGGTCTTATCCGGGTTATGCTGGTGATTTGTTGGTGGATCCCACTACTGGTGCTAGTTATAATGCTAATGGTGCTAATGGGAGGAAATATTTGCTTCCTGCTTTGTATGATCCTTCTACATCTTCTTGTTCTACATTGGTGTGA 975 0.4164 MGYFVSSHCFFKILFLLCLFQLSFASKKLNELVEDQSQLLHYHNGPLLYGKISINLIWYGNFKPSQKAIITDFITTLSTQTPQSNQPSVATWWKTTEKYYNHCKHRSHVPSCVPFPLSVSLGNQIYQNYTLGKSLTNKHILHLASKGDQRNAINVVLTSYDVTVKGFCSRCGTHGSSSSSSKVMGKNKNYKFAYIWVGNSETQCPGQCAWPFHQPIYGPQNPPLIAPNNDVGVDGMVINLATLLAGTVTNPFGNGYFQGPSEEPLEAATACPGVYGKGSYPGYAGDLLVDPTTGASYNANGANGRKYLLPALYDPSTSSCSTLV 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0478 324 Pfam Phosphate-induced protein 1 conserved region 40 323 IPR006766 -
Lal21g0478 324 PANTHER PROTEIN EXORDIUM-LIKE 5 7 324 IPR006766 -
Lal21g0478 324 PANTHER PROTEIN EXORDIUM-RELATED 7 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0478 Lal-Chr21 3391885 3392859 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0478 - - gmx:100791695 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0478 21 3391885 3392859 Lal21g0478 21 3391885 3392859 ECH
Lal21g0478 21 3391885 3392859 Lal4g0362 4 2459960 2461295 LSH
Lal18g1157 18 14452852 14453808 Lal21g0478 21 3391885 3392859 PCT
Lal6g0468 6 2976249 2977208 Lal21g0478 21 3391885 3392859 PCT
Lal21g0478 21 3391885 3392859 Lal18g1157 18 14452852 14453808 PCT
Lal21g0478 21 3391885 3392859 Lal6g0468 6 2976249 2977208 PCT