Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0469 ATGACATTCTCTAATGTGTTGTCTTTGGCCATATTGGTAGCAATTAACATTGCCATGCCAACCCTTGCAGCCATATACACTGTGGGAGATAACTCAGGTTGGACAATTGGTGCTGATTATAGCACATGGACCAGTGACAAGACCTTTTCAGTTGGTGATAGTCTTGTGTTCAACTATGGAGCTGGGCACACAGTAGATGAAGTAAAAGAGAGTGACTACAAATCCTGCACTACAGGAAATTCAATAAGTACAGATAGCAGTGGTGCCACCACCATTGCTCTAAAGAGTGAAGGCACTCATTACTTCATATGTGCTATTCCTGGACACTGTGCTGGTGGCATGAAACTGGCTGTTACTGTTAAAGCAGGAAAACAAACTACTCCTTCTACAACACCATCATCATCATCATCGGGTAAAGGTTCACCTTCTGATGCAACCACAGACACACCCACCACCCAATCTTCCACTAAATCAAATGCATCTTCAGCAAGTAGTGCCTCACCATTTATTGCTATGTTGGGTCACTTGCTATGTTTTGCTTCTGCTATGAGATTCAACTGA 561 0.4296 MTFSNVLSLAILVAINIAMPTLAAIYTVGDNSGWTIGADYSTWTSDKTFSVGDSLVFNYGAGHTVDEVKESDYKSCTTGNSISTDSSGATTIALKSEGTHYFICAIPGHCAGGMKLAVTVKAGKQTTPSTTPSSSSSGKGSPSDATTDTPTTQSSTKSNASSASSASPFIAMLGHLLCFASAMRFN 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0469 186 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Lal21g0469 186 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Lal21g0469 186 MobiDBLite consensus disorder prediction 125 163 - -
Lal21g0469 186 Gene3D - 22 126 IPR008972 -
Lal21g0469 186 CDD Phytocyanin 26 120 - -
Lal21g0469 186 PANTHER BLUE COPPER PROTEIN-LIKE 6 174 - -
Lal21g0469 186 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Lal21g0469 186 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Lal21g0469 186 PANTHER BLUE COPPER PROTEIN 6 174 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0469 Lal-Chr21 3338091 3339999 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0469 34 120 Miscellaneous Gene Families AT1G22480 73.563 1.56e-39 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0469 - - gmx:100306522 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0469 21 3338091 3339999 Lal21g0469 21 3338091 3339999 ECH