Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0460 ATGGAGAAATATAAGGATGTTAATCATAGTTTGCAGACACATTCCTCGTTGGTTCGGAGGCTTTCTCAAGAGCGAGAGTTAGAGGGGCATCTTGGTTGTGTTAATGCAGTGGCTTGGAATTCCAAAGGTTCATTATTGATATCTGGATCAGATGACACACGAATCAATATTTGGAGCTATTCTGACCGAAAACTCTTGCATTCAATTGACACCGGACATTCTGCAAACATATTCTGTACTAGGTTTGTACCAGAAACTTCTGATGAGCTTGTGGTCTCTGGAGCTGGAGATGCTGAAGTCCGGTTGTTTAATTTGTCTTGCTTAAGTGGGAGAGGGCCTGGCAATAATGCCATTGTTCCATCAGCTCTTTACCAATGCCATACTAGAAGAGTAAAGAAATTGGCTGTTGAAAATGGAAACCCCAATGTGGTATGGAGTGCTAGTGAAGATGGGACCCTGAGACAGCATGATTTTCGAGAAGGTACATCTTGTCCTCCAGCAGGGTCTTCACACCAAGAGTGTCGAAATGTTCTACTTGACCTGCGGAGTGGAGCTAAGAGGTCACTTGCTGATCCCCCTAAACAAGTCCTTGCTCTAAAATCTTGTGATATTAGCACAACCAGACCACATTTGCTCCTTGTTGGTGGGAGTGATGCCTTTGCACGTTTATATGATAGGAGGATGCTACCGCCTCTAAGCTCCTGTCGGAAAAGAATGTCACCACCTCCTTGTGTTAATTATTTCTGTCCAATGCATCTTTCTGATCGTGGACATCCAGGTGTGCACTTAACTCATGTTGCATTCAGTCCTGATGGATATGAGGTTCTCCTTAGCTATAGTGGGGAGCATGTTTACTTGATGGATGTAAATCATGCTGGTGCGAATGAGATGCAATATACTTCAGGAGATGTTTCAAAGCTAATGACTTACTCTCCAACAACTGTTGGGGTAGAATCGCAGCCTTTTGTGTCTAATGCCTTCCCAAATGGTTTTCCTATTAAAAAGAACATTGCTGAAAAGCTTGACATGTGCAAGAAGCTATTAAAATTTGCTAAGAAGTCACTGAACAAGGAGACGGCACCCCATTATGGAATAGAGGCTTGTAATGAAGTTTTGAATGGCCAGAGTCATGTTGTTGGGCCTGCACTAAAATATGAATGCCTGTGTATTCGTGCTGCACTATTACTTCAGAGGAAGTGGAAAAACGATGCTTATATGGCCATAAGAGACTGTCATGCTGCTAGGAAAATTGATAATTCCTCATATAAACCACTTTACTACATGTCAGAAGCCTTGTCACAGTTGCATAGACACAAAGAAGCTTTAGATTTTGCTGTTGCTTCCCATTCATTGGCCCCATCCATATCTGAAGTTTCAGAAAGAGTAGAGAAGGTGAAGAAGGATATAGCTTCAGCTGAATTTGAGAAGAGTATTAAGGCAAACCGTGGAGCATCATTTCATACTCGAGGTGGAAGAATATTATCATTGAATGACATGCTCTATCGTTCAGAAGCTAATAGTGATGCTTCACAAGATGGTGCAATATCAGAGAGGGATGATTCTGATTACGATGAAGAATTGGAGTTGGACTTTGAAACATCCATATCTGGTGATGAGGGACATGATGATGAATCCAATATTCTTCATGGGAGTTTAAATCTTAGAATTCATCGGAGAGACGACTCCGGAGAAAATGCTAGTGCAAATGGCTTGTGTGAATCACCCTCATTTTCATCACAGAACAATGGAGCTTGTTATCAGGCTGAAGCAGTTATTGATATGAGGCAGAGATTTGTTGGCCACTGCAATGTTGGAACTGATATAAAGCAAGCCAGTTTTCTTGGTCAAAGAGGTGAATATGTTGCCAGTGGAAGTGATGATGGTAGATGGTTTATTTGGGAAAAGAAGACTGGTAGGCTTATAAAAATGCTGAATGGTGATGAATCCGTTGTAAATTGTATACAATGCCATCCATTTGATTTTGTTGTGGCAACTAGTGGGATAGACAGCACAATAAAGATATGGACTCCCAGTGCTCCTCTTCCATCTTCTGTAGCTGGTGGTTCAGCAGGACCTGAAACTGGGGACGTGTTGACTGCTATGGAGAACAATCAAGAGAAGTTATCCCTTAGTCGTGATACTATTCTTTTCAACAAAGCTCAATTGCATGACATGAATCTAGTCTAG 2187 0.417 MEKYKDVNHSLQTHSSLVRRLSQERELEGHLGCVNAVAWNSKGSLLISGSDDTRINIWSYSDRKLLHSIDTGHSANIFCTRFVPETSDELVVSGAGDAEVRLFNLSCLSGRGPGNNAIVPSALYQCHTRRVKKLAVENGNPNVVWSASEDGTLRQHDFREGTSCPPAGSSHQECRNVLLDLRSGAKRSLADPPKQVLALKSCDISTTRPHLLLVGGSDAFARLYDRRMLPPLSSCRKRMSPPPCVNYFCPMHLSDRGHPGVHLTHVAFSPDGYEVLLSYSGEHVYLMDVNHAGANEMQYTSGDVSKLMTYSPTTVGVESQPFVSNAFPNGFPIKKNIAEKLDMCKKLLKFAKKSLNKETAPHYGIEACNEVLNGQSHVVGPALKYECLCIRAALLLQRKWKNDAYMAIRDCHAARKIDNSSYKPLYYMSEALSQLHRHKEALDFAVASHSLAPSISEVSERVEKVKKDIASAEFEKSIKANRGASFHTRGGRILSLNDMLYRSEANSDASQDGAISERDDSDYDEELELDFETSISGDEGHDDESNILHGSLNLRIHRRDDSGENASANGLCESPSFSSQNNGACYQAEAVIDMRQRFVGHCNVGTDIKQASFLGQRGEYVASGSDDGRWFIWEKKTGRLIKMLNGDESVVNCIQCHPFDFVVATSGIDSTIKIWTPSAPLPSSVAGGSAGPETGDVLTAMENNQEKLSLSRDTILFNKAQLHDMNLV 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0460 728 Coils Coil 455 475 - -
Lal21g0460 728 SMART WD40_4 246 288 IPR001680 GO:0005515
Lal21g0460 728 SMART WD40_4 192 225 IPR001680 GO:0005515
Lal21g0460 728 SMART WD40_4 62 104 IPR001680 GO:0005515
Lal21g0460 728 SMART WD40_4 591 634 IPR001680 GO:0005515
Lal21g0460 728 SMART WD40_4 117 157 IPR001680 GO:0005515
Lal21g0460 728 SMART WD40_4 20 59 IPR001680 GO:0005515
Lal21g0460 728 SMART WD40_4 637 676 IPR001680 GO:0005515
Lal21g0460 728 Gene3D - 533 680 IPR015943 GO:0005515
Lal21g0460 728 Gene3D Tetratricopeptide repeat domain 333 487 IPR011990 GO:0005515
Lal21g0460 728 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 27 59 - -
Lal21g0460 728 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 7 715 IPR045151 -
Lal21g0460 728 SUPERFAMILY WD40 repeat-like 20 675 IPR036322 GO:0005515
Lal21g0460 728 ProSiteProfiles Trp-Asp (WD) repeats profile. 27 68 IPR001680 GO:0005515
Lal21g0460 728 Pfam WD domain, G-beta repeat 24 59 IPR001680 GO:0005515
Lal21g0460 728 Pfam WD domain, G-beta repeat 640 675 IPR001680 GO:0005515
Lal21g0460 728 ProSiteProfiles Trp-Asp (WD) repeats profile. 644 675 IPR001680 GO:0005515
Lal21g0460 728 PANTHER WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1 7 715 - -
Lal21g0460 728 SUPERFAMILY TPR-like 384 458 IPR011990 GO:0005515
Lal21g0460 728 Gene3D - 11 323 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0460 Lal-Chr21 3258301 3269198 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0460 K11807 - gmx:100793917 1191.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0460 21 3258301 3269198 Lal21g0460 21 3258301 3269198 ECH